DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT5 and Cct6a

DIOPT Version :9

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_033968.2 Gene:Cct6a / 12466 MGIID:107943 Length:531 Species:Mus musculus


Alignment Length:526 Identity:165/526 - (31%)
Similarity:279/526 - (53%) Gaps:48/526 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 AIKTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVDHEIAKLMVQLSQS 98
            |:..:|.|||.:...|:|:|||||..|::||..||:.:|.||..::..|::.|..|.|:.:::.:
Mouse    19 ALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATA 83

  Fly    99 QDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQLDAIAQPFPVDPKNK 163
            |||..|||||..|::.|.||:||:..|..|:||..|.:|||.|.:.|::.|:.:.....:|   :
Mouse    84 QDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMD---R 145

  Fly   164 EPLIQIAMTTLGSKIVNKCHRQMAEMAVDAVL-NVADIEKKDVNFELIKIETKVGGRME------ 221
            |.||.:|.|:|.:|:    |.::|::..:||: ::..|.|||...:|..:|.     ||      
Mouse   146 ETLIDVARTSLRTKV----HAELADVLTEAVVDSILAIRKKDEPIDLFMVEI-----MEMKHKSE 201

  Fly   222 -DSMLVKGVIVDKTLSHSQMPKELRNVKLAILTCPFEPPKPKTKHKLDVTSAEDYRALREYEQ-- 283
             |:.|::|:::|....|..|.|.:.|.  .||||.......||    :|.|...|::..|.|:  
Mouse   202 TDTSLIRGLVLDHGARHPDMKKRVENA--YILTCNVSLEYEKT----EVNSGFFYKSAEEREKLV 260

  Fly   284 -----------EKFTQMVKQV---KDAGATLAICQWGFDDEANHLLLQQELPAVRWVGGPEIELI 334
                       :|..::.|:|   .|.| .:.|.|.|.|..:...|.::.:.|:|......:|.:
Mouse   261 KAERKFIEDRVKKIIELKKKVCGDSDKG-FVVINQKGIDPFSLDALAKEGIVALRRAKRRNMERL 324

  Fly   335 AIATGGRIVPRFEELTPEKLGVAGLVREMAFGTSKDKMLVIEECKNSKAVTIFLRGGNAMIIAEA 399
            .:|.||..:..|::|.|:.||.|.||.|...|  ::|...||:|.|.::||:.::|.|...:.:.
Mouse   325 TLACGGIALNSFDDLNPDCLGHAELVYEYTLG--EEKFTFIEKCNNPRSVTLLVKGPNKHTLTQI 387

  Fly   400 KRSIHDAICVVRSLVKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFRAFSVALESIPLALA 464
            |.:|.|.:..|::.:.|..:|.|.||.|::.:.|:.|....:....|...:||:.||..||..||
Mouse   388 KDAIRDGLRAVKNAIDDGCVVPGAGAVEVALAEALIKYKPSVKGRAQLGVQAFADALLIIPKVLA 452

  Fly   465 ENSGLHPIETLSELKARQVAEKKSSLGVDCMLSGDSDMKSHNVVESLHSKKQQILLS-TQLVKMI 528
            :|||....|||.:::|.. :|....:||| :.:|:..:.:...|...:..|:|:|.| |.:...|
Mouse   453 QNSGFDLQETLVKVQAEH-SESGQLVGVD-LSTGEPMVAAEMGVWDNYCVKKQLLHSCTVIATNI 515

  Fly   529 LKIDDV 534
            |.:|::
Mouse   516 LLVDEI 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 165/526 (31%)
Cpn60_TCP1 45..534 CDD:278544 160/513 (31%)
Cct6aNP_033968.2 chap_CCT_zeta 3..530 CDD:274088 165/526 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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