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Protein Alignment SmD3 and SMD1
DIOPT Version :9
Sequence 1: | NP_725106.1 |
Gene: | SmD3 / 36306 |
FlyBaseID: | FBgn0023167 |
Length: | 151 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_011588.3 |
Gene: | SMD1 / 852964 |
SGDID: | S000003306 |
Length: | 146 |
Species: | Saccharomyces cerevisiae |
Alignment Length: | 136 |
Identity: | 33/136 - (24%) |
Similarity: | 48/136 - (35%) |
Gaps: | 29/136 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 IKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVT-------------------YRD 52
:..|.:.....:|.|...|....|.|......||..:|.:.:| |..
Yeast 4 VNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMASLYLT 68
Fly 53 G--------RTANLENVYIRGSKIRFLILPDMLKNAPMFKKQTGKGLGGTAGRGKAAILRAQARG 109
| ..|:|:.:.|||:.||.:||||.|....:...| |.|......|:.|...::.|.
Yeast 69 GGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVDQ--KQLNSLRRSGQIANDPSKKRR 131
Fly 110 RGRGGP 115
|..|.|
Yeast 132 RDFGAP 137
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1958 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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