Protein Alignment SmD3 and SMD3

DIOPT Version :9

• Sequence 1: NP_725106.1
• Gene: SmD3 / 36306
• FlyBaseID: FBgn0023167
• Length: 151
• Species: Drosophila melanogaster
• Sequence 2: NP_013248.1
• Gene: SMD3 / 850839
• SGDID: S000004137
• Length: 101
• Species: Saccharomyces cerevisiae
• Alignment Length: 86
• Identity: 40/86 - (46%)
• Similarity: 67/86 - (77%)
• Gaps: 0/86 - (0%)

  Fly     4 GVPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDGRTANLENVYIRGSKI 68
            |:|:|:|:||:|||::.|..||..|||||:|:||:||.|:..:..|...|...:::.:::|||:|
Yeast     5 GIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRGSQI 69

  Fly    69 RFLILPDMLKNAPMFKKQTGK 89
            :|:::||:|||||:|||.:.:
Yeast    70 KFIVVPDLLKNAPLFKKNSSR 90

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD3	NP_725106.1	Sm_D3	6..75	CDD:212468	29/68 (43%)
SMD3	NP_013248.1	Sm_D3	7..76	CDD:212468	29/68 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C157341684
Domainoid	1	1.000	70	1.000	Domainoid score	I2276
eggNOG	1	0.900	-	-		E1_COG1958
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	104	1.000	Inparanoid score	I1429
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53728
OrthoFinder	1	1.000	-	-		FOG0004370
OrthoInspector	1	1.000	-	-		oto99103
orthoMCL	1	0.900	-	-		OOG6_102085
Panther	1	1.100	-	-	LDO	PTHR23338
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1359
SonicParanoid	1	1.000	-	-		X3092
TreeFam	1	0.960	-	-
	14	13.790