Protein Alignment SmD3 and AT1G20580

DIOPT Version :9

• Sequence 1: NP_725106.1
• Gene: SmD3 / 36306
• FlyBaseID: FBgn0023167
• Length: 151
• Species: Drosophila melanogaster
• Sequence 2: NP_564119.1
• Gene: AT1G20580 / 838647
• AraportID: AT1G20580
• Length: 131
• Species: Arabidopsis thaliana
• Alignment Length: 146
• Identity: 69/146 - (47%)
• Similarity: 91/146 - (62%)
• Gaps: 25/146 - (17%)

  Fly     2 SIGVPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDGRTANLENVYIRGS 66
            |:|:|:|:||||.|||:|.|..:||:|||.:||.|||.|||:..||.|.:||:.:.||:|:||||
plant     4 SLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITYTAKDGKVSQLEHVFIRGS 68

  Fly    67 KIRFLILPDMLKNAPMFKKQTGKGLGGTAGRGKAAILRAQARGRGRGGPPGGGRGTGGPPGAPGG 131
            |:||:::||:||:|||||                   |..||.:|:....|.|||.|...|.|..
plant    69 KVRFMVIPDILKHAPMFK-------------------RLDARIKGKSSSLGVGRGRGAMRGKPAA 114

  Fly   132 SGGRGAWQGGPTGGRG 147
            ..|||      |||||
plant   115 GPGRG------TGGRG 124

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD3	NP_725106.1	Sm_D3	6..75	CDD:212468	39/68 (57%)
AT1G20580	NP_564119.1	Sm_D3	8..77	CDD:212468	39/68 (57%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	87	1.000	Domainoid score	I2749
eggNOG	1	0.900	-	-		E1_COG1958
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H3078
Inparanoid	1	1.050	143	1.000	Inparanoid score	I1770
OMA	1	1.010	-	-		QHG53728
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0004370
OrthoInspector	1	1.000	-	-		otm3193
orthoMCL	1	0.900	-	-		OOG6_102085
Panther	1	1.100	-	-	LDO	PTHR23338
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X3092
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	14	13.830