Protein Alignment SmD3 and SNRPN

DIOPT Version :9

• Sequence 1: NP_725106.1
• Gene: SmD3 / 36306
• FlyBaseID: FBgn0023167
• Length: 151
• Species: Drosophila melanogaster
• Sequence 2: NP_001365180.1
• Gene: SNRPN / 6638
• HGNCID: 11164
• Length: 244
• Species: Homo sapiens
• Alignment Length: 180
• Identity: 40/180 - (22%)
• Similarity: 63/180 - (35%)
• Gaps: 42/180 - (23%)

  Fly     2 SIGVPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMN---CQMTQITVTYRDGRTANLEN--- 60
            ::|...|:|...: :.:.|....|.::.|.....:.:||   |...:    :|..:..|.:.
Human     6 TVGKSSKMLQHID-YRMRCILQDGRIFIGTFKAFDKHMNLILCDCDE----FRKIKPKNAKQPER 65

  Fly    61 --------VYIRGSKIRFLILPDM------LKNAPMFKKQTGKGLGGTAGRGKAAILRAQARGRG 111
                    |.:||..:..:.:...      :...|:.....|.|:|..||||..|.:.......|
Human    66 EEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGVPIPQAPAG 130

  Fly   112 RGGPPGGGRGTGGPPGAPGGSGGRG-----------AWQGGPT---GGRG 147
            ..||.   ||.|||........|||           :..|.||   .|||
Human   131 LAGPV---RGVGGPSQQVMTPQGRGTVAAAAVAATASIAGAPTQYPPGRG 177

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD3	NP_725106.1	Sm_D3	6..75	CDD:212468	13/82 (16%)
SNRPN	NP_001365180.1	Sm_B	9..87	CDD:212464	13/82 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1958
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	1	0.900