Protein Alignment SmD3 and Lsm4

DIOPT Version :10

• Sequence 1: NP_725106.1
• Gene: SmD3 / 36306
• FlyBaseID: FBgn0023167
• Length: 151
• Species: Drosophila melanogaster
• Sequence 2: NP_056631.2
• Gene: Lsm4 / 50783
• MGIID: 1354692
• Length: 138
• Species: Mus musculus
• Alignment Length: 146
• Identity: 51/146 - (34%)
• Similarity: 73/146 - (50%)
• Gaps: 25/146 - (17%)

  Fly     5 VPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG-RTANLENVYIRGSKI 68
            :|:.:|..|:.|.:..|...||.|.|.|:..::.||..:.::..|.||| :...:...|||||.|
Mouse     2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTI 66

  Fly    69 RFLILPDML-------------KNAP-MFKKQTGKGLGGTAGRGKAAILRAQARGRGRGGPPGGG 119
            ::|.:||.:             :..| ..|:|.|:|:|| ||||...       ||||||.||.|
Mouse    67 KYLRIPDEIIDMVREEAAKGRGRGGPQQQKQQKGRGMGG-AGRGVFG-------GRGRGGIPGAG 123

  Fly   120 RGTGGPPGAPGGSGGR 135
            ||.  |...||...|:
Mouse   124 RGQ--PEKKPGRQAGK 137

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD3	NP_725106.1	Sm_D3	6..75	CDD:212468	23/69 (33%)
Lsm4	NP_056631.2	LSm4	2..77	CDD:212470	25/74 (34%)