Protein Alignment SmD3 and lsm4

DIOPT Version :9

• Sequence 1: NP_725106.1
• Gene: SmD3 / 36306
• FlyBaseID: FBgn0023167
• Length: 151
• Species: Drosophila melanogaster
• Sequence 2: NP_956990.1
• Gene: lsm4 / 393669
• ZFINID: ZDB-GENE-040426-1652
• Length: 143
• Species: Danio rerio
• Alignment Length: 150
• Identity: 51/150 - (34%)
• Similarity: 76/150 - (50%)
• Gaps: 32/150 - (21%)

  Fly     5 VPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG-RTANLENVYIRGSKI 68
            :|:.:|..|:.|.:..|...||.|.|.|:..::.||..:.::..|.||| :...:...|||||.|
Zfish     2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTI 66

  Fly    69 RFLILP----DMLKNAPMFKKQTGKGLGGTAGRGKAAILRAQARGRGRGGPPGGGRGTGGPPGAP 129
            ::|.:|    ||:|...:.|           |||:..:.:.:.:|:||||.||.|   |||
Zfish    67 KYLRIPDEIIDMVKEEVVSK-----------GRGRGGMQQNKPQGKGRGGGPGRG---GGP---- 113

  Fly   130 GGSGGRGAWQGGPTGGRGRG 149
                |||.:     ||||||
Zfish   114 ----GRGVF-----GGRGRG 124

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD3	NP_725106.1	Sm_D3	6..75	CDD:212468	24/73 (33%)
lsm4	NP_956990.1	LSm4	2..77	CDD:212470	24/74 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910