Protein Alignment SmD3 and Lsm10

DIOPT Version :9

• Sequence 1: NP_725106.1
• Gene: SmD3 / 36306
• FlyBaseID: FBgn0023167
• Length: 151
• Species: Drosophila melanogaster
• Sequence 2: NP_001102446.1
• Gene: Lsm10 / 366468
• RGDID: 1584914
• Length: 122
• Species: Rattus norvegicus
• Alignment Length: 96
• Identity: 24/96 - (25%)
• Similarity: 45/96 - (46%)
• Gaps: 10/96 - (10%)

  Fly     7 IKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDGRTANLENVYIRGSKIRFL 71
            |.:|...:|.|.|.:.....|.||::...:..||.::..:|.|.|.|....|:::::.|..:|::
  Rat    18 IILLQGLQGQITTVDLRDESVARGRIDNVDAFMNIRLANVTYTDRWGHQVELDDLFVTGRNVRYV 82

  Fly    72 ILPDMLKNAPMFKKQT----------GKGLG 92
            .:||.:......::|.          |||.|
  Rat    83 HIPDGVNITATIEQQLQIIHRVRNFGGKGQG 113

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD3	NP_725106.1	Sm_D3	6..75	CDD:212468	17/67 (25%)
Lsm10	NP_001102446.1	LSm10	8..85	CDD:212480	17/66 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1958
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810