Protein Alignment SmD3 and LSM4

DIOPT Version :10

• Sequence 1: NP_725106.1
• Gene: SmD3 / 36306
• FlyBaseID: FBgn0023167
• Length: 151
• Species: Drosophila melanogaster
• Sequence 2: NP_036453.1
• Gene: LSM4 / 25804
• HGNCID: 17259
• Length: 139
• Species: Homo sapiens
• Alignment Length: 147
• Identity: 52/147 - (35%)
• Similarity: 74/147 - (50%)
• Gaps: 26/147 - (17%)

  Fly     5 VPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG-RTANLENVYIRGSKI 68
            :|:.:|..|:.|.:..|...||.|.|.|:..::.||..:.::..|.||| :...:...|||||.|
Human     2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTI 66

  Fly    69 RFLILP----DMLKNAPMF-----------KKQTGKGLGGTAGRGKAAILRAQARGRGRGGPPGG 118
            ::|.:|    ||:|...:.           |:|.|:|:|| ||||...       ||||||.||.
Human    67 KYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGG-AGRGVFG-------GRGRGGIPGT 123

  Fly   119 GRGTGGPPGAPGGSGGR 135
            |||.  |...||...|:
Human   124 GRGQ--PEKKPGRQAGK 138

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD3	NP_725106.1	Sm_D3	6..75	CDD:212468	24/73 (33%)
LSM4	NP_036453.1	LSm4	2..77	CDD:212470	24/74 (32%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	87..139		25/62 (40%)