DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment SmD3 and Snrpn

DIOPT Version :9

Sequence 1:	NP_725106.1	Gene:	SmD3 / 36306	FlyBaseID:	FBgn0023167	Length:	151	Species:	Drosophila melanogaster
Sequence 2:	NP_001076430.1	Gene:	Snrpn / 20646	MGIID:	98347	Length:	240	Species:	Mus musculus

Alignment Length:	181	Identity:	41/181 - (22%)
Similarity:	64/181 - (35%)	Gaps:	42/181 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MSIGVPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMN---CQMTQITVTYRDGRTANLEN-- 60
            |::|...|:|...: :.:.|....|.::.|.....:.:||   |...:    :|..:..|.:.
Mouse     1 MTVGKSSKMLQHID-YRMRCILQDGRIFIGTFKAFDKHMNLILCDCDE----FRKIKPKNAKQPE 60

  Fly    61 ---------VYIRGSKIRFLILPDM------LKNAPMFKKQTGKGLGGTAGRGKAAILRAQARGR 110
                     |.:||..:..:.:...      :...|:.....|.|:|..||||..|.:.......
Mouse    61 REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGVPIPQAPA 125

  Fly   111 GRGGPPGGGRGTGGPPGAPGGSGGRG-----------AWQGGPT---GGRG 147
            |..||.   ||.|||........|||           :..|.||   .|||
Mouse   126 GLAGPV---RGVGGPSQQVMTPQGRGTVAAAAVAATASIAGAPTQYPPGRG 173

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
SmD3	NP_725106.1	Sm_D3	6..75	CDD:212468	13/82 (16%)
Snrpn	NP_001076430.1	Sm_B	5..83	CDD:212464	13/82 (16%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	163..240		6/11 (55%)
		Repeat-rich region	175..236
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1958
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900