Protein Alignment SmD3 and lsm-4

DIOPT Version :9

• Sequence 1: NP_725106.1
• Gene: SmD3 / 36306
• FlyBaseID: FBgn0023167
• Length: 151
• Species: Drosophila melanogaster
• Sequence 2: NP_495514.1
• Gene: lsm-4 / 174193
• WormBaseID: WBGene00003078
• Length: 123
• Species: Caenorhabditis elegans
• Alignment Length: 149
• Identity: 44/149 - (29%)
• Similarity: 65/149 - (43%)
• Gaps: 33/149 - (22%)

  Fly     5 VPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG-RTANLENVYIRGSKI 68
            :|:.:|..|:.|.:..|...||.|.|.|...:..||..:..:..|.:|| :...:...|:|||.|
 Worm     3 LPLSLLKTAQNHPMLVELKNGETYNGHLKACDSWMNIHLVDVIFTSKDGDKFFKMSEAYVRGSTI 67

  Fly    69 RFLILPDMLKNAPMFKKQTGKGLGGTAGRGKAAILRAQAR--GRGRGGPPGGGRGTGGPPGAPGG 131
            ::|.:|:.:  ..:.|.:..:            :.|.|.|  .|||||      |.||..|..||
 Worm    68 KYLRIPETV--VDLVKTEVNE------------VRRQQQREQSRGRGG------GRGGRGGHRGG 112

  Fly   132 SGGRGAWQGGPTGGRGRGG 150
            .|.||          ||||
 Worm   113 GGNRG----------GRGG 121

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD3	NP_725106.1	Sm_D3	6..75	CDD:212468	21/69 (30%)
lsm-4	NP_495514.1	LSm4	3..78	CDD:212470	22/76 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910