Sequence 1: | NP_610735.1 | Gene: | Prp8 / 36304 | FlyBaseID: | FBgn0033688 | Length: | 2396 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_619600.2 | Gene: | Prpf8 / 192159 | MGIID: | 2179381 | Length: | 2335 | Species: | Mus musculus |
Alignment Length: | 2343 | Identity: | 2134/2343 - (91%) |
---|---|---|---|
Similarity: | 2248/2343 - (95%) | Gaps: | 14/2343 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 55 PAGGHTNGIPIPVGGQGPGLGQIPTPKPDILTEEKLQEKALKWQHLQSKRFAEKRKFGFVDTQKE 119
Fly 120 DMPPEHIRKIIRDHGDMTSRKYRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVQVLYHITG 184
Fly 185 AITFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLE 249
Fly 250 AIQIELDNDEDNAVYKWFYDHRPLVDT-QFVNGTTYRKWNLSLPQLATLYRLANQLLTDLVDNNF 313
Fly 314 FYLFDPKSFFTAKALNMAIPGGPKFEPLIKDHNVGDEDWNEFNDINKVIIRQPIRTEYRIAFPYL 378
Fly 379 YNNMPHFVHLSWYHTPNVVYIKTEDPDLPAFYFDPLINPISHRNANSKIQEPLPDDDEDFTLPDD 443
Fly 444 VQPFLQDTPLYTDNTANGIALLWAPRPFNMRSGRSRRAIDVPLVKCWYKEHCPPGHPVKVRVSYQ 508
Fly 509 KLLKYYVLNALKHRKPKPQKKRYLFRSFKATKFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNL 573
Fly 574 NYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSHVQYRLNNVDAFQLADGL 638
Fly 639 QYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRG 703
Fly 704 ITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMHDIVDMMPEGIKQNKART 768
Fly 769 ILQHLSEAWRCWKANIPWKVPGLPIPIENMILRYVKMKADWWTNTAHYNRERIRRGATVDKTVCK 833
Fly 834 KNLGRLTRLYLKAEQERQHNYLKDGPYISPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKL 898
Fly 899 LILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYS 963
Fly 964 HLIPVYEVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPSDTEPPPLLAYKWCQGINNLQDVWDV 1028
Fly 1029 GEGECNVLLESRFEKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRG 1093
Fly 1094 LQFSSFITQYYGLVLDLLVLGLHRSSEMAGPPQMPNDFLTFQDTVTETAHPIRLYCRYVDRIHLF 1158
Fly 1159 FRFSAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPR 1223
Fly 1224 SVTTIGWESTFVSVYSKDNPNLLFNMSGFECRILPKCRTQNEEFTHRDGVWNLQNEITKERTAQC 1288
Fly 1289 FLRVDDESLGRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCEN 1353
Fly 1354 KIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMS 1418
Fly 1419 HDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLF 1483
Fly 1484 QKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHT 1548
Fly 1549 LFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQV 1613
Fly 1614 QLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRK 1678
Fly 1679 SYKMNSSCADILLFPAYKWNVSRPSLLADTKDTMDNTTTQKYWLDIQLRWGDYDSHDVERYARAK 1743
Fly 1744 FLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGCKTLIQQAMAKIMKANPALYVLRERIR 1808
Fly 1809 KALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1873
Fly 1874 TGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLD 1938
Fly 1939 FPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRAL 2003
Fly 2004 HVNTERTKIILKPDKTTITEAHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIR 2068
Fly 2069 DIILGMEISAPSAQRQQIAEIEKQTKEQNQLTATTTRTTNKHGDEIITSTTSNYETQTFSSKTEW 2133
Fly 2134 RVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNILKKFVTISDLRAQIAGYLYGVSPPDNPQ 2198
Fly 2199 VKEIRCIVMPPQWGTHQTINLPNTLPTHQYLKDMEPLGWIHTQPNELPQLSPQDITTHAKIMQEN 2263
Fly 2264 SNWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGSKNTDKGNNPKGYLPSHYERVQMLLSNKFL 2328
Fly 2329 GFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHELHRTSHFLLFSNLEDGGDGAGADRED 2393
Fly 2394 VYA 2396 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Prp8 | NP_610735.1 | PRP8 | 64..2396 | CDD:227505 | 2129/2332 (91%) |
PRO8NT | 118..268 | CDD:285342 | 134/149 (90%) | ||
PROCN | 456..856 | CDD:285343 | 376/399 (94%) | ||
RRM_4 | 1046..1137 | CDD:287556 | 85/90 (94%) | ||
U5_2-snRNA_bdg | 1270..1402 | CDD:287555 | 127/131 (97%) | ||
U6-snRNA_bdg | 1502..1660 | CDD:287554 | 156/157 (99%) | ||
RNase_H_like_Prp8_IV | 1826..2076 | CDD:260013 | 243/249 (98%) | ||
MPN_PRP8 | 2127..2377 | CDD:163687 | 222/249 (89%) | ||
Prpf8 | NP_619600.2 | PRP8 | 1..2335 | CDD:227505 | 2132/2341 (91%) |
Reverse transcriptase homology domain | 812..1303 | 456/490 (93%) | |||
Linker | 1304..1577 | 267/272 (98%) | |||
Important for branch point selection. /evidence=ECO:0000250 | 1513..1526 | 11/12 (92%) | |||
Restriction endonuclease homology domain | 1581..1752 | 160/170 (94%) | |||
Involved in interaction with pre-mRNA 5' splice site. /evidence=ECO:0000250 | 1669..2034 | 353/364 (97%) | |||
RNase H homology domain | 1767..2020 | 246/252 (98%) | |||
Required for interaction with EFTUD2 and SNRNP200. /evidence=ECO:0000250 | 2301..2335 | 21/34 (62%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167841570 | |
Domainoid | 1 | 1.000 | 816 | 1.000 | Domainoid score | I65 |
eggNOG | 1 | 0.900 | - | - | E1_COG5178 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H4706 | |
Inparanoid | 1 | 1.050 | 4447 | 1.000 | Inparanoid score | I4 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S96 |
OMA | 1 | 1.010 | - | - | QHG53611 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0004087 | |
OrthoInspector | 1 | 1.000 | - | - | oto93587 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101765 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR11140 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1384 |
SonicParanoid | 1 | 1.000 | - | - | X2835 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.740 |