DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8407 and LOC679822

DIOPT Version :9

Sequence 1:NP_001163124.1 Gene:CG8407 / 36303 FlyBaseID:FBgn0033687 Length:104 Species:Drosophila melanogaster
Sequence 2:XP_038942941.1 Gene:LOC679822 / 679822 RGDID:1583666 Length:89 Species:Rattus norvegicus


Alignment Length:83 Identity:27/83 - (32%)
Similarity:46/83 - (55%) Gaps:2/83 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LVKHTDMNEEMRIEAIELSITACEKYSSNYEHAAKIIKENMDKKFGIYWHVVVGEGFGFEVSYET 84
            ::.:.||:|.|:.:::|.:..|.||.|.....||. .||..|||.....|.:||...|...::||
  Rat     7 VITNADMSEGMQQDSVERAAQALEKCSMEKGIAAP-SKEESDKKSNPTRHCIVGRTSGSYGTHET 70

  Fly    85 ENILYLFFAGNLAIVLWK 102
            :..:: |..|.:|::|:|
  Rat    71 KPFIH-FSLGQVAVLLFK 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8407NP_001163124.1 Dynein_light 18..102 CDD:279552 26/81 (32%)
LOC679822XP_038942941.1 Dynein_light 1..89 CDD:413603 27/83 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1520814at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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