DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8407 and Dynll2

DIOPT Version :9

Sequence 1:NP_001163124.1 Gene:CG8407 / 36303 FlyBaseID:FBgn0033687 Length:104 Species:Drosophila melanogaster
Sequence 2:NP_542428.1 Gene:Dynll2 / 140734 RGDID:619860 Length:89 Species:Rattus norvegicus


Alignment Length:102 Identity:36/102 - (35%)
Similarity:62/102 - (60%) Gaps:15/102 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADEEAGKEGEKKIVHVYPLVKHTDMNEEMRIEAIELSITACEKYSSNYEHAAKIIKENMDKKFG 65
            |:|.:|             ::|:.||:|:|:.:|::.:..|.|||:...:.|| .||:..|||:.
  Rat     1 MSDRKA-------------VIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAA-YIKKEFDKKYN 51

  Fly    66 IYWHVVVGEGFGFEVSYETENILYLFFAGNLAIVLWK 102
            ..||.:||..||..|::||::.:| |:.|.:||:|:|
  Rat    52 PTWHCIVGRNFGSYVTHETKHFIY-FYLGQVAILLFK 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8407NP_001163124.1 Dynein_light 18..102 CDD:279552 32/83 (39%)
Dynll2NP_542428.1 DLC-like_DYNLL1_DYNLL2 5..88 CDD:412000 34/98 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3430
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1520814at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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