DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsd and ckl12

DIOPT Version :10

Sequence 1:NP_610733.1 Gene:bsd / 36302 FlyBaseID:FBgn0027504 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_680447.1 Gene:ckl12 / 835804 AraportID:AT5G57015 Length:435 Species:Arabidopsis thaliana


Alignment Length:173 Identity:51/173 - (29%)
Similarity:83/173 - (47%) Gaps:6/173 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   491 NGDQKLRSRGSKHLDNNPTEYKF-LPTEEEHVFLIDFGLASKFQDRGVHRPFIMDQRRAHDGTLE 554
            |..:...|:...|.|..|..:.. |......|.:||||||.|::|...|:.....:.:...||..
plant   114 NRVEYFHSKSFLHRDLKPDNFLMGLGRRANQVHIIDFGLAKKYRDNTTHQHIPYRENKNLTGTAR 178

  Fly   555 FTSRDAHLG-AHSRRSDLECLGYNLLYWSEGYLPWKDVAQQQQQEKVHRAKELFMTDVPEMLRQF 618
            :.|.:.||| ..|||.|||.|||.|:|:.:|.|||:.:....:::|..|..|..::...|.|.:.
plant   179 YASMNTHLGIEQSRRDDLESLGYILMYFLKGSLPWQGLKAGTKKQKYERISEKKVSTSIESLCRG 243

  Fly   619 YGKQVPKYLGEFLLQIGQLAYQERPNYERYRKIFKREYQRLGY 661
            |    |.....:......|.:.::|:|...::||:..:.|.|:
plant   244 Y----PSEFASYFHYCRSLRFDDKPDYGYLKRIFRDLFIREGF 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsdNP_610733.1 Protein Kinases, catalytic domain 112..>286 CDD:473864
Protein Kinases, catalytic domain <517..652 CDD:473864 41/135 (30%)
ckl12NP_680447.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 50/171 (29%)
Blue background indicates that the domain is not in the aligned region.

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