DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsd and ckl4

DIOPT Version :10

Sequence 1:NP_610733.1 Gene:bsd / 36302 FlyBaseID:FBgn0027504 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_194615.2 Gene:ckl4 / 829007 AraportID:AT4G28860 Length:414 Species:Arabidopsis thaliana


Alignment Length:262 Identity:71/262 - (27%)
Similarity:113/262 - (43%) Gaps:36/262 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   493 DQKL------RSRGSKHLDNNPTEYKF-LPTEEEHVFLIDFGLASKFQDRGVHRPFIMDQRRAHD 550
            ||.|      .|:|..|.|..|..:.. |..:...|:|||||||.:::|...:|.....:.:...
plant   110 DQMLTRIEYVHSKGYLHRDIKPDNFLMGLGRKANQVYLIDFGLAKRYRDANTNRHIPYRENKNLT 174

  Fly   551 GTLEFTSRDAHLG-AHSRRSDLECLGYNLLYWSEGYLPWKDVAQQQQQEKVHRAKELFMTDVPEM 614
            ||..:.|.:.||| ...||.|||.|||.|||:..|.|||:.:....:::|..:..|..::...|:
plant   175 GTARYASCNTHLGIEQGRRDDLESLGYVLLYFLRGSLPWQGLKAVDKKQKYDKICEKKISTPIEV 239

  Fly   615 LRQFYGKQVPKYLGEFLLQIGQLAYQERPNYERYRKIFKREYQRLG------YDPCQMRLSSEEI 673
            |    .|..|.....:......|.:.:||:|...:::|:..:.|.|      ||...::....:.
plant   240 L----CKSHPVEFASYFHYCHTLTFDQRPDYGFLKRLFRDLFSREGYEFDYIYDWTIIKYQQSQK 300

  Fly   674 LRTCVSTKDVVDGSKCDIFELNNKAAV-----NVMRNSTLSTPFQEHSLTNRVSPKNLRSKSNKK 733
            .|   |....|.||       :|..|:     |....:.:|   .|..:::||.|.|....|.:.
plant   301 TR---SQSQAVPGS-------SNARAIPMDTSNHRGGTKIS---HEAQVSDRVRPANASGPSPQI 352

  Fly   734 TT 735
            .|
plant   353 NT 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsdNP_610733.1 Protein Kinases, catalytic domain 112..>286 CDD:473864
Protein Kinases, catalytic domain <517..652 CDD:473864 41/135 (30%)
ckl4NP_194615.2 Protein Kinases, catalytic domain 8..282 CDD:473864 52/175 (30%)
Blue background indicates that the domain is not in the aligned region.

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