DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG8878 and AT3G03940

DIOPT Version :9

Sequence 1:	NP_001260913.1	Gene:	CG8878 / 36302	FlyBaseID:	FBgn0027504	Length:	1004	Species:	Drosophila melanogaster
Sequence 2:	NP_187044.1	Gene:	AT3G03940 / 819551	AraportID:	AT3G03940	Length:	701	Species:	Arabidopsis thaliana

Alignment Length:	438	Identity:	100/438 - (22%)
Similarity:	156/438 - (35%)	Gaps:	147/438 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly   494 QKLRSRGSKHLDNNPTEYKFL-----PTEEEHVFLIDFGLASKFQD--RGVHRPFIMDQR-RAHD 550
            :||..:|..|.|..|.  .||     ..:|:.::|||.||||:::|  .|.|..:  ||| ....
plant   258 EKLHMKGFVHGDVKPE--NFLLGQPGTADEKKLYLIDLGLASRWKDSHSGQHVEY--DQRPDVFR 318

  Fly   551 GTLEFTSRDAHLG-AHSRRSDLECLGYNLLYWSEGYLPWKDVAQQQQQEKVHRAKELFMTDVPEM 614
            ||:.:.|..|||| ..|||.|||.|.|.|::...|.|||:......:...|.:.|   |:..||:
plant   319 GTIRYASCHAHLGRTGSRRDDLESLAYTLIFLMRGRLPWQGYQGDNKSFLVCKKK---MSTSPEL 380

  Fly   615 LRQFYGKQVPKYLGEFLLQIGQLAYQERPNYERYRKIF-----------------------KR-- 654
            :..|    .|.....||..:..:.:.|.|||.:...||                       ||
plant   381 MCCF----CPPPFKLFLEAVTNMKFDEEPNYAKLISIFDTLIEPCAISRPIRIDGALKVGQKRGR 441

  Fly   655 ---------------------------------EYQRLGYDPCQMRL-------SSEEILRTCVS 679
                                             ..||..|:...:||       :.:.:..:||:
plant   442 LLINLEEDEQPRKKIRIGSPATQWISVYNARRPMKQRYHYNVADLRLAQHVEKGNEDGLFISCVA 506

  Fly   680 TK--------DVVDGSKCDIFEL--------------------------NNKAAVNVMRNSTLST 710
            :.        |...|....::||                          ||.:::.||..   .|
plant   507 SSANLWAIIMDAGTGFSSQVYELSSVFLHKDWIMEQWEKNYYISSIAGANNGSSLVVMAK---GT 568

  Fly   711 PFQEHSLTNRVSPKNLRSKSNKK---------TTKKKFSWAEVLSQDPDQIARERAVK-EFEREE 765
            |:.:.|.  :||........|||         .|.....|..|:|::...  .|:.|: :|
plant   569 PYTQQSY--KVSDSFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNSGY--SEQVVELDF---- 625

  Fly   766 TICPLESRLPRRYEGKPTYAILDMEQRRREKGLVV---QEHIEEEEED 810
             :.|.|. :.||:|.  .|.|..|.....:..|::   :..|.:|.::
plant   626 -LYPSEG-IHRRWES--GYRITSMAATADQAALILSIPKRKITDETQE 669

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG8878	NP_001260913.1	PKc_like	112..>286	CDD:304357
		SPS1	123..>284	CDD:223589
		SPS1	<491..756	CDD:223589	86/378 (23%)
		PKc_like	<517..652	CDD:304357	47/138 (34%)
AT3G03940	NP_187044.1	STKc_CK1	140..414	CDD:270918	55/166 (33%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1164
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900