DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8878 and vrk1

DIOPT Version :9

Sequence 1:NP_001260913.1 Gene:CG8878 / 36302 FlyBaseID:FBgn0027504 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_988955.1 Gene:vrk1 / 394552 XenbaseID:XB-GENE-1003796 Length:410 Species:Xenopus tropicalis


Alignment Length:655 Identity:138/655 - (21%)
Similarity:207/655 - (31%) Gaps:300/655 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 GTILRDVLSKAWRLGRPIGKGNFGEIFLASDD---TVCPASSETAKYVVKIEPHSNGPLFVEIHC 173
            |.:|.|...|.|:||.|||:|.||.::||.::   ||.|    .|.||:|:||..|||||.|:..
 Frog    26 GEVLTDSAKKQWKLGLPIGQGGFGRLYLADENSSRTVGP----DAPYVIKVEPSENGPLFSELKF 86

  Fly   174 LINTSRNNDLSDAAEDAASLPAPQTHVLSRGPPSGIPSFIASGTHYFGDVRYRFLVLPRFDRDLH 238
            .:..::.:.:...:         .:|.|..   .|:|.:..||.|......|||:|:.||.:||.
 Frog    87 YMRAAKPDQIQKWS---------TSHKLKY---LGVPRYWGSGLHTKNGNSYRFMVMDRFGQDLQ 139

  Fly   239 SLIKNSR--VQQKSLLVLAVHIINVLENLHDKGYCHNDIKAQNLMVSKCKYLRRQVVPKGNGYED 301
            .:.:|..  ..:|::|.|.:.:|::||.:|:..|.|.||||.||::                   
 Frog   140 KIFENQGKIFPRKTVLQLGLRLIDILEYIHEHEYVHGDIKASNLLI------------------- 185

  Fly   302 HYEEKQQTTDSGNSSEQETNDDDYFLKSEKFALKKIVDIKQDEDEDDEDFDDGATSNSNNSNSLD 366
                                                                             
 Frog   186 ----------------------------------------------------------------- 185

  Fly   367 VFHTPVNKKRSARNAIQFSGSNPVRACRREKRNSMYEEMVKSHYLRPTKRISYREEFNEDGYPKE 431
                                                      |:..|                  
 Frog   186 ------------------------------------------HHKNP------------------ 190

  Fly   432 TAENSDESPESSDNESDEFIPPSSRRSVIKRGRSAQIATPKKTPVSTRASRQEKVKKEPNGDQKL 496
                                                                             
 Frog   191 ----------------------------------------------------------------- 190

  Fly   497 RSRGSKHLDNNPTEYKFLPTEEEHVFLIDFGLASKFQDRGVHRPFIMDQRRAHDGTLEFTSRDAH 561
                                  :.|||:|:|||.::....||:.:..|.|:.|:||:||||.|||
 Frog   191 ----------------------DQVFLVDYGLAYRYCPDSVHKEYKEDPRKCHNGTIEFTSIDAH 233

  Fly   562 LG-AHSRRSDLECLGYNLLYWSEGYLPWKDVAQQQQQEKVHRAKELFMTDVPEMLRQ-FYGKQVP 624
            .| :.|||.|||.|||.::.|..|.|||:|  .......|..:|..:..|..|::.. |.||..|
 Frog   234 KGVSPSRRGDLEILGYCMIQWLCGRLPWED--NLGDANYVTNSKIRYGDDSSELMEACFPGKNKP 296

  Fly   625 KYLGEFLLQIGQLAYQERPNYERYRKIFKREYQRLGYDPCQMRLSSEEILRTCVSTKDVVDGSKC 689
            :.:.:|:..:.:|:|..:|.|...|:|..:..:.:|                   :||  || |.
 Frog   297 EEIRKFMEAVKELSYTTKPPYPHLREILLQGLKTIG-------------------SKD--DG-KL 339

  Fly   690 DIFELNNKAAVNVMRNSTLSTPFQEHSLTNRVSPKNLRSKSNKKTTKKKFSWAEVLSQDPDQIAR 754
            | |.|....||:............:||......|       |....|||              ||
 Frog   340 D-FSLCENGAVSHNGRKRKLAKVTDHSAEESEEP-------NLADQKKK--------------AR 382

  Fly   755 ERAVK 759
            .||.|
 Frog   383 GRAAK 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8878NP_001260913.1 PKc_like 112..>286 CDD:304357 61/178 (34%)
SPS1 123..>284 CDD:223589 57/165 (35%)
SPS1 <491..756 CDD:223589 72/266 (27%)
PKc_like <517..652 CDD:304357 51/136 (38%)
vrk1NP_988955.1 STKc_VRK1 26..326 CDD:271024 115/548 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D371612at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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