DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8878 and Vrk2

DIOPT Version :9

Sequence 1:NP_001260913.1 Gene:CG8878 / 36302 FlyBaseID:FBgn0027504 Length:1004 Species:Drosophila melanogaster
Sequence 2:XP_008768654.1 Gene:Vrk2 / 360991 RGDID:1311585 Length:503 Species:Rattus norvegicus


Alignment Length:730 Identity:156/730 - (21%)
Similarity:244/730 - (33%) Gaps:286/730 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 YTLRPSVVNGTILRDVLSKAWRLGRPIGKGNFGEIFLASDDTVCPAS--SETAKYVVKIEPHSNG 165
            |.|...:..|.||.|:....|.||:.||.|.||.|:||     .|.:  .:.|::|:|:|...||
  Rat     9 YKLPVPLPEGKILDDMEGNQWALGKMIGSGGFGLIYLA-----FPTNKPEKDARHVIKVEYQENG 68

  Fly   166 PLFVEIHCLINTSRNNDLSDAAEDAASLPAPQTHVLSRG-PPSGIPSFIASGTHYFGDVRYRFLV 229
            |||.|:...             :.||.....|..|..|. ...|:|.|...|...|....|||:|
  Rat    69 PLFSELKFY-------------QRAAKRECIQKWVKQRKLDYLGVPVFYGFGLTDFKGRSYRFMV 120

  Fly   230 LPRFDRDLHSLI-KNSRVQQKSLLVLAVHIINVLENLHDKGYCHNDIKAQNLMVSKCKYLRRQVV 293
            :.|...||..|: :|...::.::|.|.:.:::|||.:|:..|.|.||||.||::           
  Rat   121 MERLGIDLQKLLNQNGAFKKLTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLL----------- 174

  Fly   294 PKGNGYEDHYEEKQQTTDSGNSSEQETNDDDYFLKSEKFALKKIVDIKQDEDEDDEDFDDGATSN 358
                ||                                                           
  Rat   175 ----GY----------------------------------------------------------- 176

  Fly   359 SNNSNSLDVFHTPVNKKRSARNAIQFSGSNPVRACRREKRNSMYEEMVKSHYLRPTKRISYREEF 423
                                        :||                                  
  Rat   177 ----------------------------ANP---------------------------------- 179

  Fly   424 NEDGYPKETAENSDESPESSDNESDEFIPPSSRRSVIKRGRSAQIATPKKTPVSTRASRQEKVKK 488
                                                                             
  Rat   180 ----------------------------------------------------------------- 179

  Fly   489 EPNGDQKLRSRGSKHLDNNPTEYKFLPTEEEHVFLIDFGLASKFQDRGVHRPFIMDQRRAHDGTL 553
                                          :.|:|.|:||:.::...|.|:.:..|.|:.|:|||
  Rat   180 ------------------------------DRVYLADYGLSYRYCPNGNHKQYHEDPRKGHNGTL 214

  Fly   554 EFTSRDAHLG-AHSRRSDLECLGYNLLYWSEGYLPWKDVAQQQQQEKVHRAKELFMTDVPE-MLR 616
            ||||.|||.| |.|||||:|.|||.:|.|..|.|||:  ...:....|..||...:.::|| :|:
  Rat   215 EFTSLDAHKGVAPSRRSDVEILGYCMLRWLCGKLPWE--TNLENPVAVQTAKTKLLDELPESVLK 277

  Fly   617 QFYGKQVPKYLGEFLLQIGQLAYQERPNYERYRKIFKREYQRLGYDPCQMRLSSEEI-LRTCVST 680
            ........:.|.||.:.:..|||..:|:|::.:||...:...||  |......::.: ::|.:..
  Rat   278 WTTSGSSCRELAEFFMYVHNLAYDAKPDYQKLKKILNPDGVPLG--PLDFSTKAQGVNMQTPIHR 340

  Fly   681 KDVVDGSKCDIFELNNKAAVNVMR---NSTLSTPFQEHS-------LTNRVSPKNLRSKSNKK-- 733
            |  ||..|. |.:..|:......|   ..|.:|..:|..       |::..:|:|.|::..::  
  Rat   341 K--VDSPKA-IKKPANEFPTKYTRKVCGETRATWREEQEERRPAVLLSDLATPENSRTRKVREYS 402

  Fly   734 -TTKKKFSWAEVLSQDPDQIARERAVKEFEREETICPLESRLPR---RYEGKPT--YAILDMEQR 792
             |..:..|:.:..|....|.:..:...:..|.:.|     |.||   :|..|||  ..:.|:|..
  Rat   403 DTFSEMLSFRQTQSYPRFQGSHCKPYLDCTRRDPI-----RKPRPLPQYGSKPTGNLGVTDLESS 462

  Fly   793 RREKGLVVQEHIEEE 807
            .|....|:|..:.||
  Rat   463 PRFWPAVLQLTLSEE 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8878NP_001260913.1 PKc_like 112..>286 CDD:304357 59/177 (33%)
SPS1 123..>284 CDD:223589 55/164 (34%)
SPS1 <491..756 CDD:223589 75/280 (27%)
PKc_like <517..652 CDD:304357 52/136 (38%)
Vrk2XP_008768654.1 PKc_like 16..314 CDD:304357 116/548 (21%)
Pkinase 29..290 CDD:278497 103/511 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D371612at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11909
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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