DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8878 and CG9962

DIOPT Version :9

Sequence 1:NP_001260913.1 Gene:CG8878 / 36302 FlyBaseID:FBgn0027504 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_608697.1 Gene:CG9962 / 33448 FlyBaseID:FBgn0031441 Length:319 Species:Drosophila melanogaster


Alignment Length:154 Identity:45/154 - (29%)
Similarity:71/154 - (46%) Gaps:10/154 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   503 HLDNNPTEYKF-LPTEEEHVFLIDFGLASKFQDRGVHRPFIMDQRRAHD--GTLEFTSRDA-HLG 563
            |.|..|..:.. :......:.||||||:.::.|...:|.  :.|||...  ||..:.|.:| ...
  Fly   132 HRDIKPENFLMGVGLTRHRLHLIDFGLSKRYWDMKENRH--VPQRRGTKWAGTARYASVNALCCK 194

  Fly   564 AHSRRSDLECLGYNLLYWSEGYLPWKDVAQQQQQEKVHRAKELFMTDVPEMLRQFYGKQVPKYLG 628
            ..|||.|||.:||.|:|...|.|||:.:....:.:|.....|:.::.:|..|...|    |....
  Fly   195 VQSRRDDLESVGYVLIYLLRGSLPWQGLLPNSKLQKAEMILEMKLSTLPNSLCAGY----PNEFY 255

  Fly   629 EFLLQIGQLAYQERPNYERYRKIF 652
            .:::...||.::|.|:|...|..|
  Fly   256 NYIIYTRQLGFEEEPDYRMIRCTF 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8878NP_001260913.1 PKc_like 112..>286 CDD:304357
SPS1 123..>284 CDD:223589
SPS1 <491..756 CDD:223589 45/154 (29%)
PKc_like <517..652 CDD:304357 41/137 (30%)
CG9962NP_608697.1 SPS1 16..>259 CDD:223589 38/132 (29%)
STKc_CK1 17..279 CDD:270918 44/152 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11909
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.000

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