DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8878 and Vrk1

DIOPT Version :9

Sequence 1:NP_001260913.1 Gene:CG8878 / 36302 FlyBaseID:FBgn0027504 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_001351296.1 Gene:Vrk1 / 22367 MGIID:1261847 Length:440 Species:Mus musculus


Alignment Length:739 Identity:145/739 - (19%)
Similarity:226/739 - (30%) Gaps:356/739 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 GTILRDVLSKAWRLGRPIGKGNFGEIFLASDDTVCPASSETAKYVVKIEPHSNGPLFVEIHCLIN 176
            |.:|.|:..|.|:||.|||:|.||.|:||..::..|..|: |..|||:||..|||||.|:.....
Mouse    26 GEVLTDMSRKEWKLGLPIGQGGFGCIYLADTNSSKPVGSD-APCVVKVEPSDNGPLFTELKFYQR 89

  Fly   177 TSRNNDLSDAAEDAASLPAPQTHVLSRGPPSGIPSFIASGTHYFGDVRYRFLVLPRFDRDLHSLI 241
            .::...:....         :||.|..   .|:|.:..||.|......|||:::.||..||..:.
Mouse    90 AAKPEQIQKWI---------RTHKLKY---LGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIY 142

  Fly   242 KNS--RVQQKSLLVLAVHIINVLENLHDKGYCHNDIKAQNLMVSKCKYLRRQVVPKGNGYEDHYE 304
            :.:  |..:|::|.|::.|:::||.:|:..|.|.||||.||::|                     
Mouse   143 EANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLS--------------------- 186

  Fly   305 EKQQTTDSGNSSEQETNDDDYFLKSEKFALKKIVDIKQDEDEDDEDFDDGATSNSNNSNSLDVFH 369
                                                                             
Mouse   187 ----------------------------------------------------------------- 186

  Fly   370 TPVNKKRSARNAIQFSGSNPVRACRREKRNSMYEEMVKSHYLRPTKRISYREEFNEDGYPKETAE 434
                                                                             
Mouse   187 ----------------------------------------------------------------- 186

  Fly   435 NSDESPESSDNESDEFIPPSSRRSVIKRGRSAQIATPKKTPVSTRASRQEKVKKEPNGDQKLRSR 499
                                                                             
Mouse   187 ----------------------------------------------------------------- 186

  Fly   500 GSKHLDNNPTEYKFLPTEEEHVFLIDFGLASKFQDRGVHRPFIMDQRRAHDGTLEFTSRDAHLG- 563
                 ..||          :.|:|:|:|||.::...|||:.:..|.:|.|||||||||.|||.| 
Mouse   187 -----HKNP----------DQVYLVDYGLAYRYCPDGVHKEYKEDPKRCHDGTLEFTSIDAHKGV 236

  Fly   564 AHSRRSDLECLGYNLLYWSEGYLPWKDVAQQQQQEKVHRAKELFMTDVPEMLRQ-FYGKQVPKYL 627
            |.|||.|||.|||.::.|..|.|||:|  ..:....|..:|..:..:|..::.: |..|..|..:
Mouse   237 APSRRGDLEILGYCMIQWLSGCLPWED--NLKDPNYVRDSKIRYRDNVAALMEKCFPEKNKPGEI 299

  Fly   628 GEFLLQIGQLAYQERPNYERYRKIFKREYQRLGYDPCQMRLSSEEILRTCVSTKDVVDGSKCDIF 692
            .:::..:..|.|.|:|.|:..|.|..:..:.:|                   :||  ||      
Mouse   300 AKYMESVKLLEYTEKPLYQNLRDILLQGLKAIG-------------------SKD--DG------ 337

  Fly   693 ELNNKAAVNVMRNSTLSTPFQEHSLTNRVSPKNLRSKSNKKTTKKKFSWAEVLSQDPDQIARERA 757
                |...:.:.|.::.|                     :..:||:...||              
Mouse   338 ----KLDFSAVENGSVKT---------------------RPASKKRKKEAE-------------- 363

  Fly   758 VKEFEREETICPLESRLPRRYEGKPTYAILDMEQRRREKGLVVQEHIEEEEEDADEDDEEENQEA 822
                  |..:|.:|                |||..            :.:.::|.:....|:|.|
Mouse   364 ------ESAVCAVE----------------DMECS------------DTQVQEAAQTRSVESQGA 394

  Fly   823 MDIDQEEDGEAADSAEGEDESDRS 846
            :      .|..:..|.|...||.|
Mouse   395 I------HGSMSQPAAGCSSSDSS 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8878NP_001260913.1 PKc_like 112..>286 CDD:304357 62/175 (35%)
SPS1 123..>284 CDD:223589 57/162 (35%)
SPS1 <491..756 CDD:223589 67/266 (25%)
PKc_like <517..652 CDD:304357 52/136 (38%)
Vrk1NP_001351296.1 STKc_VRK1 26..326 CDD:271024 117/545 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 379..440 10/40 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D371612at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11909
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

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