DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8878 and ttbk-5

DIOPT Version :9

Sequence 1:NP_001260913.1 Gene:CG8878 / 36302 FlyBaseID:FBgn0027504 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_501832.1 Gene:ttbk-5 / 182232 WormBaseID:WBGene00007305 Length:373 Species:Caenorhabditis elegans


Alignment Length:172 Identity:46/172 - (26%)
Similarity:75/172 - (43%) Gaps:33/172 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   500 GSKHLDNNPTEYKFLPTEEEH-----VFLIDFGLA---SKFQDRGVHRPFIMDQRRAHD-----G 551
            |..|.|..|..: .:..|::.     |.::|||||   :||.:...    ....|||..     |
 Worm   145 GFVHRDIKPQNF-MMGNEDDKERARIVHILDFGLARSFAKFSESSK----TWSARRARGTAEFRG 204

  Fly   552 TLEFTSRDAHLGAHSRR-SDLECLGYNLLYWSEGYLPWKDVAQQQQQEKVHRAKELFMTDVPEML 615
            ||.:||.:.|......| .|:..|.:.|:..:.| |||::|.::::.|    |.::.|||...||
 Worm   205 TLRYTSPNVHFRKEQGRVDDIWSLLFVLIELNGG-LPWQNVQKREEVE----AMKMIMTDQDVML 264

  Fly   616 RQFYGKQVPKYLGEFLLQIGQLAYQERPNYERYRKIFKREYQ 657
                  .:|..:.:.:.....|....||:   |..:||..:|
 Worm   265 ------NMPPCMCDIIPHFRTLDCYMRPD---YLLVFKALWQ 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8878NP_001260913.1 PKc_like 112..>286 CDD:304357
SPS1 123..>284 CDD:223589
SPS1 <491..756 CDD:223589 46/172 (27%)
PKc_like <517..652 CDD:304357 39/148 (26%)
ttbk-5NP_501832.1 PKc_like 27..295 CDD:389743 45/168 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.