DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsd and spe-6

DIOPT Version :10

Sequence 1:NP_610733.1 Gene:bsd / 36302 FlyBaseID:FBgn0027504 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_499482.1 Gene:spe-6 / 176582 WormBaseID:WBGene00004960 Length:379 Species:Caenorhabditis elegans


Alignment Length:233 Identity:60/233 - (25%)
Similarity:100/233 - (42%) Gaps:37/233 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   518 EEHVFLIDFGLASKFQDRGVHRPFIMDQRRAHD--GTLEFTSRDAHLGAHS---RRSDLEC---L 574
            |..|:::|||.|.||.|:   ...|:..|.|..  ||.::.:..||  :|.   .|.|||.   :
 Worm   161 ESTVYILDFGFARKFVDK---EGKIIPPRTAAALMGTFQYCAVSAH--SHKDQCARDDLESWFYM 220

  Fly   575 GYNLLYWSEGYLPWKDVAQQQQQEKVHRAKELFMTDVPEMLRQFYGKQVPKYLGEFLLQIGQLAY 639
            |..||   :|.|||.::...:..:::..||....:   |.||..:.:.|||...|.|..:.|.:|
 Worm   221 GIELL---KGPLPWANIDGHKNHKQIGEAKVAIRS---EPLRSEFFEGVPKQFNEILTILDQTSY 279

  Fly   640 QERPNYERYRKIFKR---EYQRLGYDPCQMRLSSEEILRTCVSTKDVVDGSKCDIFELNNKAAVN 701
            .:||||::...:..:   |:|....:|...:.:..      :..|.:..|...:..:.:.|....
 Worm   280 FDRPNYKKLGDLLSQAATEHQVTLKEPLDWQNNER------MQQKAIFVGELGESHQASAKLDAK 338

  Fly   702 VMRNSTLSTPFQEHSLTNRVSPKNLRSKS---NKKTTK 736
            ...|.::...|.:      :.||...|||   .|..||
 Worm   339 DNANESMDIEFDD------MPPKEGISKSLSAEKSCTK 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsdNP_610733.1 Protein Kinases, catalytic domain 112..>286 CDD:473864
Protein Kinases, catalytic domain <517..652 CDD:473864 44/141 (31%)
spe-6NP_499482.1 STKc_TTBK 25..293 CDD:270919 44/142 (31%)
Blue background indicates that the domain is not in the aligned region.

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