DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8878 and vrk-1

DIOPT Version :9

Sequence 1:NP_001260913.1 Gene:CG8878 / 36302 FlyBaseID:FBgn0027504 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_495185.1 Gene:vrk-1 / 174004 WormBaseID:WBGene00017895 Length:610 Species:Caenorhabditis elegans


Alignment Length:919 Identity:165/919 - (17%)
Similarity:284/919 - (30%) Gaps:375/919 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 RPVYTLRPSVVNGTILRDVLSKAWRLGRPIGKGNFGEIFLASDDTVCPASSETAKYVVKIEPHSN 164
            :.::.|...|..|..:.|:..|.:.:|:....|.||.|.      .|....::.:.|:||||.:|
 Worm     9 KKLHELAAEVRVGHKINDISKKTFIVGKQFATGGFGRIH------TCTEEGKSQQMVMKIEPSTN 67

  Fly   165 GPLFVEIHCLINTSRNNDLSDAAEDAASLPAPQTHVLSRGPPSGIPSFIASGTHYFGDVRYRFLV 229
            |||..|: .:.|.....:|.::.:....:..           .|:|..||:|...:...:.|:::
 Worm    68 GPLLTEV-VVFNRILKKELIESYKKKKKISW-----------IGLPYLIANGYFTYESEKMRYMI 120

  Fly   230 LPRFDRDLHSL--IKNSRVQQKSLLVLAVHIINVLENLHDKGYCHNDIKAQNLMVSKCKYLRRQV 292
            :|::...|.::  .....:..|..|.:|..|::.||.||:..|.|.|:||.|:::          
 Worm   121 IPKYATSLEAVRETNGGTLAMKDSLTVASCILDALEYLHESDYAHADVKAANILL---------- 175

  Fly   293 VPKGNGYEDHYEEKQQTTDSGNSSEQETNDDDYFLKSEKFALKKIVDIKQDEDEDDEDFDDGATS 357
                        |||                                                  
 Worm   176 ------------EKQ-------------------------------------------------- 178

  Fly   358 NSNNSNSLDVFHTPVNKKRSARNAIQFSGSNPVRACRREKRNSMYEEMVKSHYLRPTKRISYREE 422
                    .|:.|.|                                                  
 Worm   179 --------GVYSTAV-------------------------------------------------- 185

  Fly   423 FNEDGYPKETAENSDESPESSDNESDEFIPPSSRRSVIKRGRSAQIATPKKTPVSTRASRQEKVK 487
                                                                             
 Worm   186 ----------------------------------------------------------------- 185

  Fly   488 KEPNGDQKLRSRGSKHLDNNPTEYKFLPTEEEHVFLIDFGLASKFQDRGVHRPFIMDQRRAHDGT 552
                                               |:|||||.: ....|.:|   |::|||:||
 Worm   186 -----------------------------------LVDFGLAHR-TTNNVDKP---DKKRAHNGT 211

  Fly   553 LEFTSRDAHLGAH-SRRSDLECLGYNLLYWSEGYLPWKDVAQQQQQEKVHRAKELFMTDVPEMLR 616
            ..|||.|||.|.: |.|.|:|.|.|||:.|:.|.|||  :|.:...|||..||:.|:..:|..|:
 Worm   212 CIFTSTDAHRGNNPSFRGDIEILAYNLMMWATGTLPW--MALESSPEKVFDAKQKFIAGLPGTLQ 274

  Fly   617 QFYGKQVPKYLG--EFLLQIGQLAYQERPNYERYRKIFKREYQRLGYDPCQMRLSSEEILRTCVS 679
            .....:....:|  ..:..|..     :.||.  .|:...:.::|..|..|              
 Worm   275 NVLKNESSAVVGCIASMFDISM-----KTNYT--DKVDMGKLKKLVTDAIQ-------------- 318

  Fly   680 TKDVVDGSKCDIFELNNKAAVNVMRNSTLSTPFQEHSLT----NRVSPKNLRSKSNKKTTKKKFS 740
             |...||.|                     ||.::..|.    |.|:||    :|.::...|:  
 Worm   319 -KTSSDGKK---------------------TPTRQKKLAEEDKNAVTPK----RSTRRLAVKE-- 355

  Fly   741 WAEVLSQDPDQIARERAVKEFEREETICPLESRLPRRYEGKPTYAILDMEQRRREKGLVVQEHIE 805
              |..::|.|::                          |.||       |::...:....::.:|
 Worm   356 --ESDNKDNDEV--------------------------EVKP-------EKKATPRKRTTRKAVE 385

  Fly   806 EEEEDADEDDEEENQEAM--------------DIDQEEDGEAADSAEGEDESDRSMEGSDCSDHS 856
            ...:..|.:::.||.::.              |:|.||:.....|:....:...|.||||.:..|
 Worm   386 VNNDSDDNEEQYENPKSKSSRTQTKSKRAKEEDVDDEEEIIIPKSSRSRSKVQLSGEGSDVTTPS 450

  Fly   857 QKRARGRPKGTSRKQTTSRQAQPHQNQPPVKVHRGVGRPGKN-SGVVKLAAGAVSKNRTTPLSAV 920
            ...:..|.:......|:|..:   .|:...|:.:...|...| |.:|.:.....|..  :|.::.
 Worm   451 SAASTSRSRSIRLGLTSSTAS---SNKVAKKIEQKYKRLSMNKSSLVPVTISVASDK--SPTTST 510

  Fly   921 ASNKRGCATRKENSTLASATGEGERKLKSGRTRRALYKTEPKHGEHDAENNSSLLVVQNLYGEYD 985
            .|:..|..:::::|   ...|||...........|:.|.:.|.|...| ..:|...::.:.|   
 Worm   511 PSSSSGLRSKRKSS---EDVGEGITLKTQVLITPAIKKAKTKSGISSA-TKASPTELRRVPG--- 568

  Fly   986 DENNYGKGR 994
             ..|:.|||
 Worm   569 -VRNFPKGR 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8878NP_001260913.1 PKc_like 112..>286 CDD:304357 43/175 (25%)
SPS1 123..>284 CDD:223589 40/162 (25%)
SPS1 <491..756 CDD:223589 67/271 (25%)
PKc_like <517..652 CDD:304357 48/137 (35%)
vrk-1NP_495185.1 STKc_VRK 26..312 CDD:270917 96/546 (18%)
SPS1 32..415 CDD:223589 121/720 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 204 1.000 Inparanoid score I2444
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11909
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.960

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