DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8878 and kin-35

DIOPT Version :9

Sequence 1:NP_001260913.1 Gene:CG8878 / 36302 FlyBaseID:FBgn0027504 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_491444.3 Gene:kin-35 / 172091 WormBaseID:WBGene00019769 Length:439 Species:Caenorhabditis elegans


Alignment Length:464 Identity:85/464 - (18%)
Similarity:160/464 - (34%) Gaps:136/464 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 RPVYTLRPSVVNGTILRDVLSKAWRLGRPIGKGNFGEIFLASDDTVCPASSETAKYVVKIEPHSN 164
            |.|.::|.::....:.......||...|.:|:|.||.::..|:      .|...:..:|||..:.
 Worm    10 RQVESIRLNIGEEVVEEKSGKLAWLTIRELGRGAFGTVYHVSN------KSTKQEAALKIERMTA 68

  Fly   165 GPLFVEIHCLINTSRNNDLSDAAEDAASLPAPQTHVLSRGPPSGIPSFIASGTHYFGD---VRYR 226
            |...::|...|..:..::                       |:.|        |.:.|   ..||
 Worm    69 GDNLLKIEREIMVAMQHE-----------------------PTAI--------HIYDDGIYKDYR 102

  Fly   227 FLVLPRFDRDLHSL--IKNSRVQQKSLLVLAVHIINVLENLHDKGYCHNDIKAQNLMV-----SK 284
            ::|:.....||..:  :.|:...|.:::.:.:..:..::.:|:..|.|.|:|..|..|     |.
 Worm   103 YIVMTLCGPDLQKIAELMNNNFNQDTIIRVCIRTLLAIKTMHEYTYIHRDLKPCNFAVDFNPNSL 167

  Fly   285 CKYLRRQVVPKGNGYEDHYEEKQQTTDSGN-------------------------SSEQETNDDD 324
            ..||          ::.....|..|.||||                         ..::.:..||
 Worm   168 HVYL----------FDYGMARKYATKDSGNKWQLRRPRNPAQFRGTVRYCSLNMHKRKELSRVDD 222

  Fly   325 ----YFLKSEKFA---------LKKIVDIKQDEDEDDEDFDDGATSNSNNSNSLDVFHTPVNKKR 376
                :|:..|.:|         .::|..:|:|              :.|...|.|.|.:......
 Worm   223 LWSWFFMLMEMYAPLPWTSSNIPERIEALKED--------------HLNEYLSKDSFLSSFLPLV 273

  Fly   377 SARNAIQFSGSNP-------VRACRREKRNSMYEEMVKSHYLRPTKRISYREEFNEDGYPKETAE 434
            ...|::|:: ..|       :...:..:.|......:|....|....::   |..|...|||.:.
 Worm   274 EYLNSVQYA-DRPDYMKIYDILYAKLTEINGKLSGPMKYDVARINALVA---ELGETARPKELSR 334

  Fly   435 NSDESPESSDNESDEFIPPSSRRSVIKRGRSAQIAT-----PKKTPVSTRASRQEKV---KKEPN 491
            ..|||      ...:::..|..|:.:..|.:..:|.     .|..|:  :.:|:||.   ||:.|
 Worm   335 MDDES------TIQKYLLASFGRAGVPGGNNLIMAELVDFFAKDVPL--KKAREEKTDDNKKQKN 391

  Fly   492 GDQKLRSRG 500
            ...|.:..|
 Worm   392 AKVKNKMLG 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8878NP_001260913.1 PKc_like 112..>286 CDD:304357 34/183 (19%)
SPS1 123..>284 CDD:223589 32/170 (19%)
SPS1 <491..756 CDD:223589 3/10 (30%)
PKc_like <517..652 CDD:304357
kin-35NP_491444.3 PKc_like 33..294 CDD:389743 56/322 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.