DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8878 and Csnk1g2

DIOPT Version :9

Sequence 1:NP_001260913.1 Gene:CG8878 / 36302 FlyBaseID:FBgn0027504 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_598763.1 Gene:Csnk1g2 / 103236 MGIID:1920014 Length:442 Species:Mus musculus


Alignment Length:600 Identity:101/600 - (16%)
Similarity:176/600 - (29%) Gaps:278/600 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 QARSLLLTGASIASDHNNSSVMESPRPVYTLRPSVVNGTILRDVLSKAWRLGRPIGKGNFGEIFL 139
            :.|.:..||.| .|:|.             :|.|..:..:|  ::...:|:|:.||.|||||:.|
Mouse    14 EGRRMSKTGTS-RSNHG-------------VRSSGTSSGVL--MVGPNFRVGKKIGCGNFGELRL 62

  Fly   140 ASDDTVCPASSETAKYV-VKIEP-HSNGPLFVEIHCLINTSRNNDLSDAAE-DAASLPAPQTHVL 201
            ..       :..|.:|| :|:|| .|..|   ::|  :.......||...| |:.:.||......
Mouse    63 GK-------NLYTNEYVAIKLEPIKSRAP---QLH--LEYRFYKQLSTTGEADSGTGPALLGQQW 115

  Fly   202 SRGP------PSGIPSFIASGTHYFGDV-RYRFLVLPRFDRDLHSL--IKNSRVQQKSLLVLAVH 257
            .|.|      ..|:|.     .:|||.. :|..:||......|..|  :.:.....|::|::|:.
Mouse   116 LRTPSMDVSFAEGVPQ-----VYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQ 175

  Fly   258 IINVLENLHDKGYCHNDIKAQNLMVSKCKYLRRQVVPKGNGYEDHYEEKQQTTDSGNSSEQETND 322
            :|..:|.:|.|...:.|:|.:|.:|.:                                      
Mouse   176 LITRMEYVHTKSLIYRDVKPENFLVGR-------------------------------------- 202

  Fly   323 DDYFLKSEKFALKKIVDIKQDEDEDDEDFDDGATSNSNNSNSLDVFHTPVNKKRSARNAIQFSGS 387
                                                                             
Mouse   203 ----------------------------------------------------------------- 202

  Fly   388 NPVRACRREKRNSMYEEMVKSHYLRPTKRISYREEFNEDGYPKETAENSDESPESSDNESDEFIP 452
                                                                             
Mouse   203 ----------------------------------------------------------------- 202

  Fly   453 PSSRRSVIKRGRSAQIATPKKTPVSTRASRQEKVKKEPNGDQKLRSRGSKHLDNNPTEYKFLPTE 517
            |.|:|                                                            
Mouse   203 PGSKR------------------------------------------------------------ 207

  Fly   518 EEHVFLIDFGLASKFQDRGVHRPFIMDQRRAHDGTLEFTSRDAHLG-AHSRRSDLECLGYNLLYW 581
            :..:.:||||||.::.|....:.....:.::..||..:.|.:.||| ..|||.|||.||:..:|:
Mouse   208 QHSIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYF 272

  Fly   582 SEGYLPWKDVAQQQQQEKVHRAKELFMTDVPEMLRQFYGKQVPKYLGEFLLQIGQLAYQERPNYE 646
            ..|.|||:.:.....:|:..:..:.......|:|.:.:    |:.:..:|..:.:|.:.|:|:|:
Mouse   273 LRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCESF----PEEMATYLRYVRRLDFFEKPDYD 333

  Fly   647 RYRKIFKREYQRLGY 661
            ..||:|...:.|.||
Mouse   334 YLRKLFTDLFDRSGY 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8878NP_001260913.1 PKc_like 112..>286 CDD:304357 49/185 (26%)
SPS1 123..>284 CDD:223589 48/172 (28%)
SPS1 <491..756 CDD:223589 40/171 (23%)
PKc_like <517..652 CDD:304357 37/135 (27%)
Csnk1g2NP_598763.1 STKc_CK1_gamma 45..359 CDD:271028 91/552 (16%)
SPS1 45..>356 CDD:223589 91/552 (16%)
CK1gamma_C 359..401 CDD:289378
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.