DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hen1 and AT4G20920

DIOPT Version :10

Sequence 1:NP_610732.1 Gene:Hen1 / 36301 FlyBaseID:FBgn0033686 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_001328415.1 Gene:AT4G20920 / 827840 AraportID:AT4G20920 Length:759 Species:Arabidopsis thaliana


Alignment Length:109 Identity:30/109 - (27%)
Similarity:45/109 - (41%) Gaps:29/109 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 EDHKFEWSRDEFKNWCLGIVEKYPNYMFS--LTGVGNP---------PKEYESVG--PVSQIAIF 234
            :|...:.:.||..|   .|||:. .|:||  ...|.:|         .::.|..|  |||.||.|
plant    79 DDDDVDITVDEAWN---NIVERI-KYIFSDEFLSVDHPLGGHLRAALQRDGERCGSLPVSVIATF 139

  Fly   235 VRKDMLEMQLVNPLVSKPNIDKESIPYKLIHTV-----EYPFYV 273
            ..|.....::::|.|       ||.|..|:..|     :.|.|:
plant   140 DAKINSRCKVIDPSV-------ESDPILLMSYVMKAAAKLPDYI 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hen1NP_610732.1 bacter_Hen1 <22..236 CDD:274962 20/65 (31%)
AT4G20920NP_001328415.1 dsrm 15..73 CDD:425434
Hen1_Lam_C 207..349 CDD:465770
dsRBD2 351..506 CDD:465529
UbiE 685..>740 CDD:441828
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.