DRSC/TRiP Functional Genomics Resources

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Protein Alignment OSCP1 and oscp1b

DIOPT Version :10

Sequence 1:NP_610731.2 Gene:OSCP1 / 36300 FlyBaseID:FBgn0033685 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_002667777.1 Gene:oscp1b / 100334608 ZFINID:ZDB-GENE-110815-4 Length:380 Species:Danio rerio


Alignment Length:380 Identity:84/380 - (22%)
Similarity:162/380 - (42%) Gaps:96/380 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ILVNLGCEMLYVIDQRLKAQQIAQDKSVQVIHDVTSVLLEPKFIDSLLNGSKHNSAQLLTAEHCK 82
            :.:|||.||||::||||:||.|..||:.:|::|:.:.:...||::.|.     ...:|.:.:..:
Zfish     9 LFINLGGEMLYILDQRLRAQNIPADKAKKVMNDIITTMFNKKFLEELF-----KPQELYSKKALR 68

  Fly    83 FMLNDIATCSLMRLDEQSMSKLWNLMTMVYKWQLFVSRHQHHLLEITFRHLEAINRLYPDAKRHM 147
            .:.:.:|..|:|||::.||.||::||||.:|:|:.:......:|.::|.|::||.....|....:
Zfish    69 TVFDRLAHASIMRLNQASMDKLYDLMTMAFKYQVLLCPRPKDILLVSFNHMDAIRDFVKDTPSIL 133

  Fly   148 -LIDFTKNTLLDFWNA-SGEDAQLSIYQTNRAWLQCFNTKISLLIRMGFQAMDGSFI-------- 202
             .:|.|...|::.:.: ||.:.|| |.||...:.|..:.::|:.::...|..:|.|:        
Zfish   134 SQVDETNKQLIEIYTSLSGGEFQL-IRQTLLIFFQDMHIRVSIFLKDKVQNSNGRFVLPTSGPVP 197

  Fly   203 ----------------------------------RDVDQDYYAEYVESAGDNIY----------- 222
                                              |:...:.|.:.|...|.|:|           
Zfish   198 FGTQTPGLIRIFSCSGEEVRRTQFRDGGNYHTALREGSFEMYGDRVIKLGTNMYSVSRPVETHMS 262

  Fly   223 --AKSADQRERQQREPNSMDQLAAQLNI-----------NPAQSEDLQPINARQFQQQFEQAFGN 274
              :|::.|..:....||.:.:  .:||:           .|..::....:|.....::.|:||  
Zfish   263 GTSKNSSQHTKVNTTPNPLAK--EELNLLARLMGGLEVQKPPSTDSGFRVNLFATDEEEEEAF-- 323

  Fly   275 VLFNDTAASSSGCEFVQLQPTTSASSSEKVA--------------TSMSRGGSLL 315
                .:.......|.:.:|.|....::.::|              :|.|:|..||
Zfish   324 ----ISRPDELSYEVINIQATKDKQTNAELAKIMGEFGETGEASPSSSSKGDDLL 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OSCP1NP_610731.2 Oscp1 26..202 CDD:431122 53/177 (30%)
oscp1bXP_002667777.1 Oscp1 17..189 CDD:431122 53/177 (30%)

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