DRSC/TRiP Functional Genomics Resources

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Protein Alignment OSCP1 and oscp1a

DIOPT Version :10

Sequence 1:NP_610731.2 Gene:OSCP1 / 36300 FlyBaseID:FBgn0033685 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001103593.1 Gene:oscp1a / 100002307 ZFINID:ZDB-GENE-080204-2 Length:391 Species:Danio rerio


Alignment Length:373 Identity:92/373 - (24%)
Similarity:160/373 - (42%) Gaps:99/373 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ILVNLGCEMLYVIDQRLKAQQIAQDKS----------VQVIHDVTSVLLEPKFIDSLLNGSKHNS 72
            :::|||.||:|::||||:|...:.:|:          .:|::|:.|.:....|::.||......|
Zfish     9 LIINLGGEMIYILDQRLRAPDESDEKTQRGCWTEDDRKRVMNDIVSTMFSKVFLEELLRPQDLYS 73

  Fly    73 AQLLTAEHCKFMLNDIATCSLMRLDEQSMSKLWNLMTMVYKWQLFVSRHQHHLLEITFRHLEAIN 137
            .:.|     :.:|..||..|:|||:..||.||::||||.:|:||.:......||.|||.|.:||.
Zfish    74 HRAL-----RTVLTRIAHTSIMRLNPASMDKLYDLMTMAFKYQLVLCPRPQDLLLITFNHTDAIK 133

  Fly   138 RLYPD----------AKRHMLIDFT----------KNTLLDFWNASGEDAQL--SIY-------- 172
            .|..|          |:|.::..:|          ::|||..:    :|.|:  ||:        
Zfish   134 ELVKDNPSLVNQINEAQRLLIEVYTPLSDGELQLIRHTLLLLF----QDMQIRVSIFLKEKIQNP 194

  Fly   173 ------QTN---------RAWLQCFNTKISLLIRMGFQAMDGSFIRDVDQ---DYYAEYVESAGD 219
                  ||:         ...::.||.|...:.|..|.: .||:...::.   |.|.:.|...|.
Zfish   195 NGHFVLQTSGPVPYGFQVPGLIRLFNAKGREVTRTRFPS-GGSYTSALNPGSLDLYGDRVTLLGT 258

  Fly   220 NIYAKSADQ------RERQQREPNSMDQLAAQLNINPAQSEDL----QPINARQFQQ--QFEQAF 272
            |:|:..:.:      ....:.:|...|...     ||..:|:|    :.:...:.|:  ..:.||
Zfish   259 NMYSTPSPEDMNPSSTNTSRGKPKQADSTP-----NPLATEELNLLAKLMGGMEVQKLSNVDAAF 318

  Fly   273 G-NVLFNDTAASSSGCE---------FVQLQPTTSASSSEKVATSMSR 310
            . |:|..:....|||..         .:.:|    |:..|..:|.::|
Zfish   319 RVNLLALNQEEESSGTSEGTDQHSSAVINIQ----ATQDELASTELAR 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OSCP1NP_610731.2 Oscp1 26..202 CDD:431122 63/230 (27%)
oscp1aNP_001103593.1 Oscp1 17..199 CDD:431122 54/190 (28%)

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