DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-4 and SET5

DIOPT Version :9

Sequence 1:NP_610730.1 Gene:Smyd4-4 / 36299 FlyBaseID:FBgn0027495 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_012077.1 Gene:SET5 / 856614 SGDID:S000001250 Length:526 Species:Saccharomyces cerevisiae


Alignment Length:507 Identity:96/507 - (18%)
Similarity:171/507 - (33%) Gaps:173/507 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 KNRNYFQALELYNKSIC-------YAEPNSEHLSIGY-------ANRSAVLFEWK----RYRQCL 128
            :|.:.|:.:....:.||       ..||.:|..:|.:       .|:|     ||    |:|:.|
Yeast    23 ENGSDFRKITPTEEEICDDVVLLWKEEPGTEDATIQHLYDRITERNQS-----WKLSASRFRKIL 82

  Fly   129 DNIKLARQANYPARLSHKLDKRERDCQQLLDQQPPDVVPYEFKLSF------EPHAQVPFIADCL 187
            :.                        ..|.|.....|..|:.|:.|      :...:|.||.|  
Yeast    83 NE------------------------HHLYDTDLETVSLYKDKIHFPKALDSDAKVEVKFIDD-- 121

  Fly   188 ELRETAAEGRFVVTNRDLAVGDLVSVEEPFCSTLLTPMRYI-------------RCATCKRENY- 238
                  ..||.:...||.:.|.::..|.       .|:.||             .||.|.:..| 
Yeast   122 ------EHGRGLFAKRDFSKGQIILKEN-------KPIVYIPPLDKLFLISNGKACARCGKALYD 173

  Fly   239 LT-------LIPCDSCCSTMFCSEECK----SIAMQTYHRYECPIIDFLNRMFNKIHCIALRTTL 292
            ||       .:.|: .|..::|||:||    |:....||.:....||.|:.              
Yeast   174 LTQHKIMVHYLDCE-VCKAIWCSEKCKKAHASLHELLYHSWRSNRIDILHA-------------- 223

  Fly   293 VALNIFPSIEELIDFCEQEQNQDKCAFDLNYNEL----TPE--EHYRAIHGLVTNQHLR------ 345
                  .:.:..:::||:.......:..|.|..:    |.|  |.::.:..:...:.::      
Yeast   224 ------GNWKRFVNYCEKYCFTAAFSVGLIYGSMLLDTTGEVKEQWQKLASISQRERIKLRDASG 282

  Fly   346 --SVSDLFQRSVVCAVLKHFIIEYTPVKEYLGGEEGV--NFFTDLLFRHLQ-----TSPSNMHGI 401
              |...|...:.|          :|..:...|.::||  |...:.::....     ..|.....|
Yeast   283 IGSTFSLLNGTTV----------HTEEESDNGTKKGVEKNIDDETVWEKCYELFCGAFPKASEEI 337

  Fly   402 DLVE--------QVNETKDDQTHSSGAYAFLSLINHSCAPNTV--RIYEGTKAYMFVLRPIKAG- 455
            |..:        .:|:      ::...|.::|.|||.|.||..  ::.|..:..:...:|||.| 
Yeast   338 DFEKFLTMIGTFNINQ------YNGQVYHWISFINHDCEPNAYIEQVEEHEELRLHARKPIKKGE 396

  Fly   456 --NVLYDN--YGAHFAICSKEQRLKRLSLQYRFDCKCEGCELNYPMFGMMPH 503
              .:.|.|  :|...       |.:.|.:.:.|.|:|:.|:.....|..:|:
Yeast   397 QIRITYVNPLHGVRL-------RRRELRVNWGFLCQCDRCQNELSTFERVPN 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-4NP_610730.1 TPR_11 67..138 CDD:290150 15/73 (21%)
zf-MYND 230..270 CDD:280009 16/51 (31%)
SET 363..463 CDD:279228 24/121 (20%)
SET5NP_012077.1 SET 41..526 CDD:225491 92/489 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 57 1.000 Domainoid score I2650
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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