DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-4 and SET6

DIOPT Version :9

Sequence 1:NP_610730.1 Gene:Smyd4-4 / 36299 FlyBaseID:FBgn0027495 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_015160.1 Gene:SET6 / 855938 SGDID:S000006086 Length:373 Species:Saccharomyces cerevisiae


Alignment Length:398 Identity:84/398 - (21%)
Similarity:137/398 - (34%) Gaps:121/398 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 HAQVPFIADCLELRETAAEGRFVVTNRDLAVGDLVSVEEPFCSTLLT----------PMRYIRCA 231
            |...||    .::|:|...||...:|.::..|..|.....|..|.::          ...|....
Yeast     8 HEISPF----FQVRQTKWGGRACFSNGNIPKGTTVLQVSNFTGTSISYEFRKEVCHNCFAYANAK 68

  Fly   232 TCKRE---NYLTLIPCDS----------CCSTMFCSEECKSIAMQ---TYHRYEC--PIIDFLNR 278
            |.|.:   :||..:.|::          .....||||.|::..:|   .....||  .::.....
Yeast    69 TMKYKLNYDYLRDLVCNAHYQINPKKFLGAGLWFCSEHCRTSYLQIPNIIELIECYEILLHHFPS 133

  Fly   279 MFNKIHCIA-----LRTTLVALNIFPS---------------------IEELIDFCEQEQNQDKC 317
            |..:.:..:     |.:.|::.|:..|                     |.:|...||.|.    |
Yeast   134 MLKRYNYTSEQEEKLNSILISENVIQSSWDEIESKWIPRINNMKSAKRINQLPPTCEDEY----C 194

  Fly   318 A--------FDLNYNELTPE-EHYRAIHGLVTNQHLRSVSDLFQRSVVCAVLKHFIIEYTPVKEY 373
            .        |:|.|  :.|: ..|||.:.|.:|: |..:|..       .||.|           
Yeast   195 CIRFVCESLFNLKY--MDPQCITYRAFNMLQSNE-LSKISKF-------PVLLH----------- 238

  Fly   374 LGGEEGVNFFTDLLFRHLQ-TSPSNMH---GIDLVEQVNETK-------------DDQTHSSGAY 421
                     |..|:|:.|. ..||::|   .|.|:..:..|:             .|.....|.:
Yeast   239 ---------FQKLVFQTLYILLPSHLHRMLSIPLLRHILGTEYGNAFGLWQEGEASDSREYFGYW 294

  Fly   422 AF--LSLINHSCAPNTVRIYEGTKAYMFVLRPIKAGNVLYDNYGAHFAICSKEQRLKRLSLQYRF 484
            .|  .|..||||.||..:..:|......:.|.||....:..:|.....:.:.::| ..|:..:.|
Yeast   295 VFPEASYFNHSCNPNITKYRKGNSMLFTMNRDIKKDEQICIDYSGVLDLPTVKRR-AFLADSWFF 358

  Fly   485 DCKCEGCE 492
            ||.||.|:
Yeast   359 DCACERCK 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-4NP_610730.1 TPR_11 67..138 CDD:290150
zf-MYND 230..270 CDD:280009 11/55 (20%)
SET 363..463 CDD:279228 24/118 (20%)
SET6NP_015160.1 SET <1..370 CDD:225491 84/398 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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