DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-4 and ATXR2

DIOPT Version :10

Sequence 1:NP_610730.1 Gene:Smyd4-4 / 36299 FlyBaseID:FBgn0027495 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_188819.2 Gene:ATXR2 / 821736 AraportID:AT3G21820 Length:473 Species:Arabidopsis thaliana


Alignment Length:577 Identity:106/577 - (18%)
Similarity:172/577 - (29%) Gaps:267/577 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DDLIKKLQDWKLIGIISGKFNELKENHRKVDFVMRALIDFKYIEKI---------FLNV------ 57
            |:||  |:|..|:||        :.:..|||.::.:.. |::|..|         |.|:      
plant    64 DELI--LKDEILVGI--------QHSSNKVDCLVCSFC-FRFIGSIEKQIGRKLYFKNLGVSGCC 117

  Fly    58 ---TLREDKCNKRSVEFRMLG------------------NEQFSLKNRNYF-------------Q 88
               :..||:|.|.:......|                  |.:.:|.:.:.|             :
plant   118 DDDSSEEDECVKYNGNEEQCGGSSSSHNTLPEGVVSSLMNGEMALPHTDKFPLPSPLSCPGGCQE 182

  Fly    89 AL-----------ELYNKSICYAEPNSEHLS-------IGYAN---------RSAVLFEWKRYRQ 126
            |.           |..:..:|..| .||.:|       |.:||         ..|:.|...|||:
plant   183 AFYCSESCAAADWESSHSLLCTGE-RSESISREALGEFIKHANDTNDIFLLAAKAIAFTILRYRK 246

  Fly   127 C-LDNI-KLARQAN----------YPARLSHKLDKRERDCQQLLDQQPPDVVPYEFKLSFEPHAQ 179
            . .::: |.|:|:.          .|..:.:|  :|..||..|    |.||.|.:          
plant   247 LKAEHVDKKAKQSEPKQSLLLEAWKPVSIGYK--RRWWDCIAL----PDDVDPTD---------- 295

  Fly   180 VPFIADCLELRETAAEGRFVVTNRDLAVGDLVSVEEPFCSTLLTPMRYIRCATCKRENYLTLIPC 244
                           ||.|.:..::||           |::|               ..|.:...
plant   296 ---------------EGAFRMQIKNLA-----------CTSL---------------ELLKIAIF 319

  Fly   245 DSCCSTMFCSEECKSIAMQTYHRYECPIIDFLNRMFNKIHCIALRTTLVALNIFPSIEELIDFCE 309
            |..|..:|..|                |...:..|| :::.:.|.......:.|..|::|.| .|
plant   320 DKECEALFSLE----------------IYGNIIGMF-ELNNLDLVVASPVEDYFLYIDDLPD-AE 366

  Fly   310 QEQNQDKCAFDLNYNELTPEEHYRAIHGLVTNQHLRSVSDLFQRSVVCAVLKHFIIEYTPVKEYL 374
            :|:.::                       :|...|.::.|                      ||.
plant   367 KEETEE-----------------------ITRPFLDALGD----------------------EYS 386

  Fly   375 GGEEGVNFFTDLLFRHLQTSPSNMHGIDLVEQVNETKDDQTHSSGAYAFLSLINHSCAPNTVRI- 438
            ...:|..||.      ||                                |.:||||.||.... 
plant   387 DCCQGTAFFP------LQ--------------------------------SCMNHSCCPNAKAFK 413

  Fly   439 ----YEGTKAYMFVLRPIKAGNVLYDNYGAHFAICSKEQRLKRLSLQYRFDCKCEGC 491
                .:| :|.:..||.|.....:..:| ....:..||:  :.|...|.|.|||..|
plant   414 REEDRDG-QAVIIALRRISKNEEVTISY-IDEELPYKER--QALLADYGFSCKCSKC 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-4NP_610730.1 SET_SMYD4 180..491 CDD:380934 53/315 (17%)
zf-MYND 230..270 CDD:460312 5/39 (13%)
ATXR2NP_188819.2 zf-MYND <173..203 CDD:460312 2/29 (7%)
SET_SMYD <380..466 CDD:380997 29/149 (19%)

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