DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-4 and SMYD3

DIOPT Version :9

Sequence 1:NP_610730.1 Gene:Smyd4-4 / 36299 FlyBaseID:FBgn0027495 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_001161212.1 Gene:SMYD3 / 64754 HGNCID:15513 Length:428 Species:Homo sapiens


Alignment Length:333 Identity:75/333 - (22%)
Similarity:116/333 - (34%) Gaps:108/333 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 TAAEGRFVVTNRDLAVGDLVSVEEPFCSTLLTPMRYIRCATC--KRENYLTLIPCDSCCSTMFCS 254
            ||..|..:.....|..|:|:...:|...|:....|.:.|..|  .:|.   |:.|..|....:||
Human    11 TAKRGNGLRAVTPLRPGELLFRSDPLAYTVCKGSRGVVCDRCLLGKEK---LMRCSQCRVAKYCS 72

  Fly   255 EECKSIAMQTYHRYECPIIDFLN--------RMFNKIHCIALRTTLVALNIFPSIEELIDFCEQE 311
            .:|:..|... |:.||..:....        |:..::                 :.:|:|....|
Human    73 AKCQKKAWPD-HKRECKCLKSCKPRYPPDSVRLLGRV-----------------VFKLMDGAPSE 119

  Fly   312 QNQDKCAFDL--NYNELTPEEHYRAIHGLV-TNQH-----------LRSVSDLFQ--RSVVCAVL 360
            ..:....:||  |.|:|| |:....:..|| |.||           |....|||:  ..|:|   
Human   120 SEKLYSFYDLESNINKLT-EDKKEGLRQLVMTFQHFMREEIQDASQLPPAFDLFEAFAKVIC--- 180

  Fly   361 KHFIIEYTPVKEYLGGEEGVNFFTDLLFRHLQTSPSNMHGIDLVEQVNETKDDQTHSSGAYAFLS 425
                                |.||        ...:.|..:.:               |.|..:|
Human   181 --------------------NSFT--------ICNAEMQEVGV---------------GLYPSIS 202

  Fly   426 LINHSCAPNTVRIYEGTKAYMFVLRPIKAGNVLYDNYGAHFAIC------SKEQRLKRLSLQYRF 484
            |:||||.||...::.|....:..:|.|:.|..|        .||      :.|:|.|:|..||.|
Human   203 LLNHSCDPNCSIVFNGPHLLLRAVRDIEVGEEL--------TICYLDMLMTSEERRKQLRDQYCF 259

  Fly   485 DCKCEGCE 492
            :|.|..|:
Human   260 ECDCFRCQ 267

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Smyd4-4NP_610730.1 TPR_11 67..138 CDD:290150
zf-MYND 230..270 CDD:280009 11/41 (27%)
SET 363..463 CDD:279228 19/99 (19%)
SMYD3NP_001161212.1 S-adenosyl-L-methionine binding. /evidence=ECO:0000269|Ref.12 14..16 0/1 (0%)
zf-MYND 49..87 CDD:280009 11/41 (27%)
SET <201..239 CDD:279228 14/45 (31%)