DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-4 and SMYD2

DIOPT Version :9

Sequence 1:NP_610730.1 Gene:Smyd4-4 / 36299 FlyBaseID:FBgn0027495 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_064582.2 Gene:SMYD2 / 56950 HGNCID:20982 Length:433 Species:Homo sapiens


Alignment Length:456 Identity:98/456 - (21%)
Similarity:152/456 - (33%) Gaps:147/456 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 EGRFVVTNRDLAVGDLVSVEEPFCSTLLTPMRYIRCATC--KRENYLTLIPCDSCCSTMFCSEEC 257
            :||.:...:...||||:.....:...|....|...|..|  ::|.   |..|..|....:|:.||
Human    17 KGRGLRALQPFQVGDLLFSCPAYAYVLTVNERGNHCEYCFTRKEG---LSKCGRCKQAFYCNVEC 78

  Fly   258 KSIAMQTYHRYEC-PIIDFLNRMFNKIHCIALRTTLVA-LNIFPSIEELIDFCEQEQNQDKCAFD 320
            :. .....|:.|| |::.| ...:|....:.|...::| ..|.|                     
Human    79 QK-EDWPMHKLECSPMVVF-GENWNPSETVRLTARILAKQKIHP--------------------- 120

  Fly   321 LNYNELTPEEHYRAIHGLVTNQHLRSV----SDLFQRSVVCAVLKHFIIEYTPVKEYLGGEEGVN 381
                |.||.|...|:...  ..||..:    .||.|..:  |.|.||      ..::||      
Human   121 ----ERTPSEKLLAVKEF--ESHLDKLDNEKKDLIQSDI--AALHHF------YSKHLG------ 165

  Fly   382 FFTDLLFRHLQTSPSNMHGIDLVEQVN----ETKDDQTHSSGAYAF--LSLINHSCAPNTVRIYE 440
                        .|.|...:.|..|||    ..:|::....|:..|  ::|:||||.||.:..|:
Human   166 ------------FPDNDSLVVLFAQVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYK 218

  Fly   441 GTKAYMFVLRPIKAGNVLYDNYGAHFAICSKEQRLKRLSLQYRFDCKCEGC-------------E 492
            ||.|.:..::.||.|..::.:|  ...:...|.|..||...|.|.|:|:.|             :
Human   219 GTLAEVRAVQEIKPGEEVFTSY--IDLLYPTEDRNDRLRDSYFFTCECQECTTKDKDKAKVEIRK 281

  Fly   493 LNYP------------------MFGMMPHKATVPSVTDDTELALSSYNYDFAVSN---------- 529
            |:.|                  .|....|..:...:.:..||:....:..|..||          
Human   282 LSDPPKAEAIRDMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQA 346

  Fly   530 -----YRKYCDFLTQYGD--------DYP-------------------CEQISSAEECLKMALHI 562
                 |.:..:...|||.        .||                   .|..::.|:.||.|:.|
Human   347 MGVCLYMQDWEGALQYGQKIIKPYSKHYPLYSLNVASMWLKLGRLYMGLEHKAAGEKALKKAIAI 411

  Fly   563 M 563
            |
Human   412 M 412

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Smyd4-4NP_610730.1 TPR_11 67..138 CDD:290150
zf-MYND 230..270 CDD:280009 10/41 (24%)
SET 363..463 CDD:279228 26/105 (25%)
SMYD2NP_064582.2 SET_SMYD2 7..269 CDD:380979 76/311 (24%)
S-adenosyl-L-methionine binding 17..19 0/1 (0%)
zf-MYND 52..90 CDD:396356 10/41 (24%)
Peptide substrate binding 183..185 0/1 (0%)