DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-4 and smyd5

DIOPT Version :9

Sequence 1:NP_610730.1 Gene:Smyd4-4 / 36299 FlyBaseID:FBgn0027495 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_001004614.2 Gene:smyd5 / 447875 ZFINID:ZDB-GENE-040912-39 Length:415 Species:Danio rerio


Alignment Length:396 Identity:82/396 - (20%)
Similarity:136/396 - (34%) Gaps:122/396 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 ADCLELR-ETAAEGRFVVTNRDLAVGDLVSVEEPFCSTLL---TPMRYIRCATCKR------EN- 237
            ::|:::| ....:|:.:...:....||.:.:|.|..|:..   ...:|..|..|.|      || 
Zfish    19 SNCVDVRFINNVKGKGLFAKKPFKKGDTIFIERPLVSSQFLWNALYKYRACEYCLRALETAEENA 83

  Fly   238 -YLTLIPC----------------DSC--CSTMFCSEECKSIAMQTYHRYEC--PIIDFLNRMFN 281
             .|:.:|.                .:|  |..|:||.||:..||..||:..|  |..|..:...|
Zfish    84 RRLSGLPALILPHPELCKVRPDRHQACPQCQVMYCSSECRQAAMDQYHKILCLGPSNDDPDHPVN 148

  Fly   282 KIHCIALR---------TTLVALNIFPSIEELID----------FCEQEQNQDK----------- 316
            |:. .|.|         :.::...:..:|::..|          ||.:..|:::           
Zfish   149 KLQ-DAWRSVHFPPETSSVMILAKMVATIKQTQDKERWQRLFTNFCSRTANEEEEIVHKLLGEKF 212

  Fly   317 -------------CAFDLNYNELTPEEHYRAIHGLV-TNQHLRSVSDLFQRSVVCAVLKHFIIEY 367
                         ..::...::....|.:|::..|| ||......|.|.|....|..|:      
Zfish   213 QGQLGLLRNLFTTALYEDRLSQWFTPEGFRSLFSLVGTNGQGIGTSSLSQWVHACDALE------ 271

  Fly   368 TPVKEYLGGEEGVNFFTDLLFRHLQTSPSNMHGIDLVEQVNETKDD-QTHSSGAYAFLSLINHSC 431
            .|.::    .|.::.|.|.|::.:.               .||.|. ....||.:...|..||||
Zfish   272 LPRQQ----REQLDAFIDQLYKDID---------------KETGDFLNCEGSGLFLLQSSCNHSC 317

  Fly   432 APNTVRIYEGTKAYMFVLRPIKAGNVLYDNYGAHFAIC-----------SKEQRLKRLSLQYRFD 485
            .||....:....   |:|.....|::     |....||           |:..|.|.|...|.|.
Zfish   318 VPNAEASFPENN---FLLHLTALGDI-----GPGEEICISYLDCCQRDRSRHSRHKILRENYLFI 374

  Fly   486 CKCEGC 491
            |.|:.|
Zfish   375 CSCQKC 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-4NP_610730.1 TPR_11 67..138 CDD:290150
zf-MYND 230..270 CDD:280009 18/65 (28%)
SET 363..463 CDD:279228 20/100 (20%)
smyd5NP_001004614.2 zf-MYND 100..135 CDD:280009 11/34 (32%)
SET <293..350 CDD:214614 18/64 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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