DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-4 and SmydA-6

DIOPT Version :10

Sequence 1:NP_610730.1 Gene:Smyd4-4 / 36299 FlyBaseID:FBgn0027495 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster


Alignment Length:360 Identity:82/360 - (22%)
Similarity:120/360 - (33%) Gaps:103/360 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 FIADCLELRETAAEGRFVVTNRDLAVGDLVSVEEPFCSTLLTPMRYIRCATCKRENYLTLIPCDS 246
            |...| |:::....|||.|...::..|:.:.:|.|.  .:|..|...||:.|..   ||...|..
  Fly     8 FARKC-EIKQNDTLGRFAVALCNVRAGETLLLENPI--VVLPLMGERRCSKCFN---LTESFCRK 66

  Fly   247 CCSTMFCSE-------ECKSIAMQTYHRYECPIIDFLNRMFNKIH--------CIALRTTLVALN 296
            |.....|.:       :||.:|...:..      |.:..:..|.|        |:.||.....| 
  Fly    67 CRLLALCEDCSDHDERDCKRLAEMNFSD------DQVELLQKKEHTEIQPVLKCLLLREHEETL- 124

  Fly   297 IFPSIEELIDFCEQEQNQDKCAFDLNYNE--LTPEEHYRAIHGLVTNQHLRSVSDLFQRSVVCAV 359
              |..||:.....|...:.......||.|  .||.:     :|.|..| ||..:|          
  Fly   125 --PLYEEMSQMDSQLMTRRGTEVWKNYQEHAFTPLD-----YGGVLAQ-LRGAAD---------- 171

  Fly   360 LKHFIIEYTPVKEYLGGEEGVNFFTDLLFRHLQTSPSNMHGIDLVEQVNETKDDQTHSSGAYAFL 424
                                    .||:...|.....|.:.|...|.....:       |.|...
  Fly   172 ------------------------EDLVQGLLGILDINAYEIRAPEVGGAMR-------GLYRRA 205

  Fly   425 SLINHSCAPN-TVRIYEGTKAYMFVLRPIKAGNVLYDNYGAHFAICSKEQRLKRLSLQYRFDCKC 488
            .|..|||.|| .:.|.:..:..::..|.|.||.:||:.|..  .:...|:|.|.|.:...|||.|
  Fly   206 GLFAHSCTPNLVISIDDEQRIKVYANRFIAAGEILYNCYTN--VLLGTEERRKILKVGKCFDCSC 268

  Fly   489 EGCELNYPMFGMMPHKATVPSVTDDTELA--LSSY 521
            ..|:                   |.|||.  :||:
  Fly   269 PRCQ-------------------DPTELGTHMSSF 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-4NP_610730.1 SET_SMYD4 180..491 CDD:380934 75/326 (23%)
zf-MYND 230..270 CDD:460312 10/46 (22%)
SmydA-6NP_611182.1 SET_SMYD <185..271 CDD:380997 27/94 (29%)

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