DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-4 and SmydA-4

DIOPT Version :10

Sequence 1:NP_610730.1 Gene:Smyd4-4 / 36299 FlyBaseID:FBgn0027495 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster


Alignment Length:410 Identity:74/410 - (18%)
Similarity:131/410 - (31%) Gaps:158/410 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 NYPARLSHK------LDKRERDCQQLLDQQPPDVVPYEFKLSFEPHAQVPFIADCLELRETAAEG 196
            |..:|..|:      .||:|   ||..:|.|.   |.|.|       ::|:     .:..:...|
  Fly    12 NNNSRARHQRGGQQSKDKQE---QQDKEQSPS---PTEEK-------ELPY-----RVEHSDIYG 58

  Fly   197 RFVVTNRDLAVGDLVSVEEPF-----------CSTLLTPMRYIRCATCKRENYLTLIPCDSCCST 250
            |::|.||.|..|:.:..|||.           |.....|:      :.|.:.|    .|..|...
  Fly    59 RYLVANRQLEAGETLIREEPLAIGPCVSGDPVCLGCYHPV------SLKADQY----RCPGCAWP 113

  Fly   251 MFCSEECKSIAMQTYHRY-----ECPIIDFLNRMFNKIHCIALRTTLVALNIFPSIEELIDFCEQ 310
            : |...|..:.    ||:     ||.:                                  :.|:
  Fly   114 L-CGSTCAGLK----HRHGHTETECQL----------------------------------YAER 139

  Fly   311 EQNQDKCAFDLNYNELTPEEHYRAIHGLVTNQHL--RSVSDLFQRSVVCAVLKHFIIEYTPVK-- 371
                                  ||:.|.:..:..  ..|.||::..::..:|  .:.::.|.:  
  Fly   140 ----------------------RAVAGELLTERAGPAEVRDLYELVMIVRIL--LLRQHDPEQFA 180

  Fly   372 -----EYLGGEEGVNFFTDLLFRHLQTSPSNMHGIDLVEQVNETKDDQTH--------------S 417
                 |....|...|   .:|:||.:...  :..:.:..|:.:.:.:|.|              .
  Fly   181 LIARMESHTEERRQN---AVLWRHYEEKV--VQRLRVTWQLEDLEAEQVHEVCGILDVNCFEIGQ 240

  Fly   418 SGA-----YAFLSLINHSCAPNTVRIYEGTKAYMFVLRP---IKAGNVLYDNYGAHFAICSKEQR 474
            :||     |....|:.|.|.|||... :...::..:||.   ::....|..:|.     .:.:..
  Fly   241 NGAKARTLYPSAFLLAHDCTPNTAHT-DDPSSFEILLRTSRRVREREALTLSYA-----YTLQGT 299

  Fly   475 LKRLSLQYR---FDCKCEGC 491
            |||.:..:.   |.|.|..|
  Fly   300 LKRRAFMHEGKLFWCCCRRC 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-4NP_610730.1 SET_SMYD4 180..491 CDD:380934 60/360 (17%)
zf-MYND 230..270 CDD:460312 8/44 (18%)
SmydA-4NP_572675.1 SET_SMYD <230..319 CDD:380997 19/94 (20%)

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