DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-4 and Zmynd15

DIOPT Version :9

Sequence 1:NP_610730.1 Gene:Smyd4-4 / 36299 FlyBaseID:FBgn0027495 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_001099270.1 Gene:Zmynd15 / 287457 RGDID:1309845 Length:738 Species:Rattus norvegicus


Alignment Length:104 Identity:29/104 - (27%)
Similarity:38/104 - (36%) Gaps:28/104 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 RDLAVGDLVSVEE-----PFCSTLL--TPMR-----------YIRCATC----KRENYLTLIPCD 245
            |.|.|||.....|     |.....|  ||||           .:|..||    |....:.|.||.
  Rat   261 RQLTVGDAHLHRELESLVPRLGVKLAKTPMRTWGPRPGFTFASLRARTCHVCHKHSFEVKLTPCP 325

  Fly   246 SCCSTMFCSEEC-----KSIAMQTYHRYECP-IIDFLNR 278
            .|.:.::|.|.|     :.......||:.|| :..|:.|
  Rat   326 QCSAVLYCGEACLQADWRRCPDDVSHRFWCPRLAAFMER 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-4NP_610730.1 TPR_11 67..138 CDD:290150
zf-MYND 230..270 CDD:280009 12/48 (25%)
SET 363..463 CDD:279228
Zmynd15NP_001099270.1 zf-MYND 309..355 CDD:280009 11/45 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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