DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-4 and Smyd5

DIOPT Version :9

Sequence 1:NP_610730.1 Gene:Smyd4-4 / 36299 FlyBaseID:FBgn0027495 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_659167.2 Gene:Smyd5 / 232187 MGIID:108048 Length:416 Species:Mus musculus


Alignment Length:423 Identity:95/423 - (22%)
Similarity:151/423 - (35%) Gaps:133/423 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 IAD----CLELRET-AAEGRFVVTNRDLAVGDLVSVEEPFCSTLL---TPMRYIRCATCKR---- 235
            :||    .:|:|.. :.:|:.:...:.:..|:.:.:|.|..:...   ...:|..|..|.|    
Mouse    15 VADRARGSVEVRYVDSIKGKGLFATQLIRKGETIFIERPLVAAQFLWNALYQYRACDHCLRALEK 79

  Fly   236 --EN--YLT-----LIP----C-------DSC--CSTMFCSEECKSIAMQTYHRYECP------- 271
              ||  .||     ::|    |       .:|  |..|:||.||:..|.:.||:..||       
Mouse    80 AEENAQRLTGKPSQILPHPELCSVRKDLHQNCPHCQVMYCSAECRLAAAEQYHQILCPGPSHDPR 144

  Fly   272 -IIDFLNRMFNKIH------CIALRTTLVALNIFPSIEELID----------FCEQEQNQDKCAF 319
             .::.|...:..:|      .|.|...:||     ::::..|          ||.:..||::...
Mouse   145 HPLNKLQEAWRSVHYPPETASIMLMARMVA-----TVKQAKDKDHWVRLFNHFCSRTANQEQAIV 204

  Fly   320 --------------------DLNYNE-----LTPEEHYRAIHGLV-TNQHLRSVSDLFQRSVVCA 358
                                :..|.|     .|| |.:|::..|| ||......|.|.|....|.
Mouse   205 HKLLKGKFKDQLELLLGLFKEALYEEALSLWFTP-EGFRSLFALVGTNGQGIGTSSLSQWVHACD 268

  Fly   359 VLKHFIIEYTPVKEYLGGEEGVNFFTDLLFRHLQTSPSNMHGIDLVEQVNETKDDQTHSSGAYAF 423
            .|     |.||     ...|.::.|.|.|::.::.:..        |.:|      ...||.:..
Mouse   269 AL-----ELTP-----QDREQLDTFIDQLYKDIEAATG--------EFLN------CEGSGLFVL 309

  Fly   424 LSLINHSCAPNTVRIYEGTKAYMFV--LRPIKAGNVLYDNYGAHFAICSKEQ----RLKRLSLQY 482
            .|..||||.||....:......:.|  |..||.|..:..:|   ...|.:|:    |.|.|...|
Mouse   310 QSCCNHSCVPNAETSFPENNFVLHVTALEDIKPGEEICISY---LDCCQRERSRHSRHKILRENY 371

  Fly   483 RFDCKCEGCELNYPMFGMMPHKATVPSVTDDTE 515
            .|:|.|..|..          :|..|:||.:.|
Mouse   372 LFNCSCPKCLA----------EADDPNVTSEEE 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-4NP_610730.1 TPR_11 67..138 CDD:290150
zf-MYND 230..270 CDD:280009 19/65 (29%)
SET 363..463 CDD:279228 23/101 (23%)
Smyd5NP_659167.2 SET <297..350 CDD:214614 16/58 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..416 5/12 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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