DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-4 and LOC1269072

DIOPT Version :10

Sequence 1:NP_610730.1 Gene:Smyd4-4 / 36299 FlyBaseID:FBgn0027495 Length:573 Species:Drosophila melanogaster
Sequence 2:XP_061511729.1 Gene:LOC1269072 / 1269072 VectorBaseID:AGAMI1_004660 Length:615 Species:Anopheles gambiae


Alignment Length:511 Identity:173/511 - (33%)
Similarity:264/511 - (51%) Gaps:38/511 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LIKKLQDWKL-IGIISGKFNEL--KENHRKVDFVMRALIDFKYIEKIFLNVTLRED-KCNKRSVE 70
            |..|:.|..| ..|:..|.|.|  ||.   ::|::..::|:.....:...:.||.| |.|.::.:
Mosquito    31 LFAKMYDTFLKPSILQAKLNNLSAKET---IEFLVPKILDWIRNNSVREQLNLRNDLKDNTKAAQ 92

  Fly    71 FRMLGNEQFSLKNRNYFQALELYNKSICYAEPNSEHLSIGYANRSAVLFEWKRYRQCLDNIKLAR 135
            .|..||:.|....:.|.:|::|||:||.::|..|...::.|||||.:..:.:||..||.||:|||
Mosquito    93 LRSEGNKMFHPNVKRYIEAIKLYNESIAFSEKGSTERALAYANRSNICLKMQRYEDCLKNIRLAR 157

  Fly   136 QANYPARLSHKLDKRERDCQQLL----------DQQPPDVVPYEFKLSFEPHAQVPFIADCLELR 190
            ::||.   ..||::||::.:..|          .:..||||. |.:||:......|.:|:|||||
Mosquito   158 ESNYS---GEKLNQREKEVKNALAKARNKNASSSKFSPDVVE-EPELSYPAKENAPQVANCLELR 218

  Fly   191 ETAAEGRFVVTNRDLAVGDLVSVEEPFCSTLLTPMRYIRCATCKRENYLTLIPCDSCCSTMFCSE 255
            :....||.|||.|.|.|||:|.:|.||.:.|....||:||..|..|...|||||:.|.:.|:|||
Mosquito   219 KNEEYGRHVVTTRKLKVGDVVMIERPFVTVLKDSFRYVRCDFCHGERPFTLIPCEGCTAAMYCSE 283

  Fly   256 ECKSIAMQTYHRYECPIIDFLNRMFNKIHCIALRTTLVALNIFP-SIEELIDFCEQEQNQDKCAF 319
            ||.|.|...||||:|.::..|...|.::..||:|...:|:..|. :.|.|.|..:.....:...|
Mosquito   284 ECLSKAYNNYHRYDCGLLRDLYEDFEEVSLIAIRMLAIAITTFDNNPEALKDHLDVLDESNVNGF 348

  Fly   320 DLNYNELTPEEHYRAIHGLVTNQHLRSVSDLFQRSVV--CAVLKHFIIEYTPVKEYLGGEEGVN- 381
            .:::|:.|.::.:..:|.|.|||..|  ..:|....:  ..:|...|:|.|.:..........| 
Mosquito   349 TMDWNKATQQDIFNTVHVLTTNQERR--HSMFVAMFIFNATILHTLILERTELGPVCEANPATNK 411

  Fly   382 FFTDLLFRHLQTSPSN-----MHGIDLVEQVNETKDDQTHSSGAYAFLSLINHSCAPNTVRI-YE 440
            |..||:.|::|....|     .:...:.|.|.|     :.:.|.|..:|::|||||||..|| ..
Mosquito   412 FLLDLILRYMQIVNCNRKLLSFNAYKVKEYVAE-----SFAVGCYPLISMLNHSCAPNVKRITLR 471

  Fly   441 GTKAYMFVLRPIKAGNVLYDNYGAHFAICSKEQRLKRLSLQYRFDCKCEGCELNYP 496
            ..:..:||:||:..|:.|:|:|.|...:..:|.|...||..|.|.|.||.|..|||
Mosquito   472 DGRCAVFVIRPVLEGSQLFDSYEAGHTLHEREMRQSMLSFIYSFQCTCEACTFNYP 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-4NP_610730.1 SET_SMYD4 180..491 CDD:380934 111/320 (35%)
zf-MYND 230..270 CDD:460312 21/39 (54%)
LOC1269072XP_061511729.1 None

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