Protein Alignment SkpB and SK18

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_563864.2
• Gene: SK18 / 837562
• AraportID: AT1G10230
• Length: 158
• Species: Arabidopsis thaliana
• Alignment Length: 155
• Identity: 66/155 - (42%)
• Similarity: 97/155 - (62%)
• Gaps: 7/155 - (4%)

  Fly     4 IRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNSVLPLPNVNSLILKKVLHWATYHKDDPV 68
            |.|.|:|.|.|:.|:.:|:   ...|.:..:.|......:||.||...||.|::.:|..|.::|.
plant     6 ILLTSSDGESFEIDEAVAR---KFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAKMHVNEPS 67

  Fly    69 VTEEVENKEKRTDDISSWDADFL-KVDQGTLFELILAANYLNIQGLLDVTCKTVANMIKGKSPQA 132
            ..:|.|..:|..|   ||||.|: |:|..|:|::||||||||.:|||....:|||:.||.|:|:.
plant    68 EEDEDEEAKKNLD---SWDAKFMEKLDLETIFKIILAANYLNFEGLLGFASQTVADYIKDKTPEE 129

  Fly   133 IRDTFAIQNDFLPQEEEQVRKENEW 157
            :|:.|.|:|||.|:|||::||||.|
plant   130 VREIFNIENDFTPEEEEEIRKENAW 154

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	47/121 (39%)
		Skp1	111..158	CDD:460222	25/47 (53%)
SK18	NP_563864.2	BTB_POZ_SKP1	5..122	CDD:349631	47/121 (39%)
		Skp1	108..154	CDD:460222	24/45 (53%)