Protein Alignment SkpB and SK21

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_567113.1
• Gene: SK21 / 825314
• AraportID: AT3G61415
• Length: 351
• Species: Arabidopsis thaliana
• Alignment Length: 163
• Identity: 48/163 - (29%)
• Similarity: 82/163 - (50%)
• Gaps: 22/163 - (13%)

  Fly     4 IRLESADKEIFDTDQEIAK-----CSETIRIAIEDLGDESDNSVLPLP-NVNSLILKKVLHWATY 62
            |.||:||..|...:||:|.     |.|.|:..:    ..|.|..:.|| .||..:|..:..:..:
plant    18 IWLETADGSIQQVEQEVAMFCPMICQEVIQKGV----GSSKNYAISLPQRVNPAMLSLIFDYCRF 78

  Fly    63 HKDDPVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTVANMIKG 127
            |:     .....|||::.     :|..|:::|...|.||..||:.|.::.|:|:|.:.:|.:|:|
plant    79 HQ-----VPGRSNKERKV-----YDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEG 133

  Fly   128 KSPQAIRDTFAIQNDFLPQEEEQVRKENEWCED 160
            |:|:.||:.|.:.:|.  .|||::.......:|
plant   134 KTPEEIREIFHLPDDL--TEEEKLEPLKNTMDD 164

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	36/126 (29%)
		Skp1	111..158	CDD:460222	15/46 (33%)
SK21	NP_567113.1	Skp1	15..116	CDD:214704	32/111 (29%)
		Skp1	117..156	CDD:460222	15/40 (38%)
		serpin	132..>192	CDD:476815	11/35 (31%)