Protein Alignment SkpB and SK5

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_567091.1
• Gene: SK5 / 825172
• AraportID: AT3G60020
• Length: 153
• Species: Arabidopsis thaliana
• Alignment Length: 160
• Identity: 68/160 - (42%)
• Similarity: 103/160 - (64%)
• Gaps: 20/160 - (12%)

  Fly     4 IRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNSVLPLPNVNSLILKKVLHWATYHKDDPV 68
            |.|:|:|.:.|:.|:::|:.|..|...:|| |..:|  |:||.||.|.|||.|:.:...|
plant     5 IMLKSSDGKSFEIDEDVARKSIAINHMVED-GCATD--VIPLRNVTSKILKIVIDYCEKH----- 61

  Fly    69 VTEEVENKEKRTDDISSWDADFLKVDQGT-LFELILAANYLNIQGLLDVTCKTV-----ANMIKG 127
                |::||:  :|:..|||||:|..:.| ||::::||||||||.|||:|||||     |:::.|
plant    62 ----VKSKEE--EDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQADLLSG 120

  Fly   128 KSPQAIRDTFAIQNDFLPQEEEQVRKENEW 157
            |:|..||..|.|:||...:|..::|:||:|
plant   121 KTPDEIRAHFNIENDLTAEEVAKIREENQW 150

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	54/126 (43%)
		Skp1	111..158	CDD:460222	24/52 (46%)
SK5	NP_567091.1	BTB_POZ_SKP1	4..112	CDD:349631	53/120 (44%)
		Skp1	99..151	CDD:460222	24/52 (46%)