Protein Alignment SkpB and SK16

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_565297.1
• Gene: SK16 / 814848
• AraportID: AT2G03190
• Length: 170
• Species: Arabidopsis thaliana
• Alignment Length: 167
• Identity: 67/167 - (40%)
• Similarity: 103/167 - (61%)
• Gaps: 14/167 - (8%)

  Fly     4 IRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNSVLPLPNVNSLILKKVLHWATYHKDDPV 68
            |.|.|:|.|.|:.::.:|:..:.|...|:|  |.:|.:: ||.||...||..|:.:...|..|.|
plant     6 IVLTSSDDESFEVEEAVARKLKVIAHMIDD--DCADKAI-PLENVTGNILALVIEYCKKHVLDDV 67

  Fly    69 --------VTEEVENKEKRTDDISSWDADFLK-VDQGTLFELILAANYLNIQGLLDVTCKTVANM 124
                    .|.|..|:|.: :::.:|||:|:| .|..|:.:||||.||||:|.||.:||:|||:.
plant    68 DDSDDSTEATSENVNEEAK-NELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLLGLTCQTVADH 131

  Fly   125 IKGKSPQAIRDTFAIQNDFLPQEEEQVRKENEWC-ED 160
            :|..||:.:|:.|.|:||:.|:||:.:||||.|. ||
plant   132 MKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFED 168

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	49/129 (38%)
		Skp1	111..158	CDD:460222	23/46 (50%)
SK16	NP_565297.1	BTB_POZ_SKP1	5..132	CDD:349631	49/129 (38%)
		Skp1	118..165	CDD:460222	23/46 (50%)