Protein Alignment SkpB and SK19

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_565295.1
• Gene: SK19 / 814845
• AraportID: AT2G03160
• Length: 200
• Species: Arabidopsis thaliana
• Alignment Length: 185
• Identity: 71/185 - (38%)
• Similarity: 102/185 - (55%)
• Gaps: 34/185 - (18%)

  Fly     4 IRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNSVLPLPNVNSLILKKVLHWATYH---KD 65
            |.|.|:|.|.|..::.:|:..:.:...|||  |.:.|.: |:|||...||.||:.:...|   .|
plant     6 IVLTSSDGESFKVEEVVARKLQIVGHIIED--DCATNKI-PIPNVTGEILAKVIEYCKKHVEDDD 67

  Fly    66 DPVVTEE--------VENKEKRTDDI-------------------SSWDADFLK-VDQGTLFELI 102
            |.|.|.|        ||..:|:.||:                   :.|||.|:| .|..|:|::|
plant    68 DVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMKDFDIKTIFDII 132

  Fly   103 LAANYLNIQGLLDVTCKTVANMIKGKSPQAIRDTFAIQNDFLPQEEEQVRKENEW 157
            |||||||:|||.|:..||:|:.||..:|:.:|:.|.|:|||.|:|||.:|.||.|
plant   133 LAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEEAIRNENAW 187

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	54/151 (36%)
		Skp1	111..158	CDD:460222	24/47 (51%)
SK19	NP_565295.1	BTB_POZ_SKP1	5..155	CDD:349631	54/151 (36%)
		Skp1	141..187	CDD:460222	23/45 (51%)