Protein Alignment SkpB and SkpD

DIOPT Version :9

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Alignment Length: 155
• Identity: 77/155 - (49%)
• Similarity: 108/155 - (69%)
• Gaps: 3/155 - (1%)

  Fly     2 PIIRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESD-NSVLPLPNVNSLILKKVLHWATYHKD 65
            |.|:|||:|..||.|:.:.||.||||:..:|....|:| |:|:|||.||:.||.|:|.||.:|||
  Fly     4 PTIKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLPKVNAFILNKILTWAYHHKD 68

  Fly    66 DPVVTEEVENKEKRT-DDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTVANMIKGKS 129
            |.....|.|....:: .|||.|||:|:.|||..|||:.:|||||.|:||.|:.|||:||||:||:
  Fly    69 DDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLANMIRGKT 133

  Fly   130 PQAIRDTFAIQNDFLPQEEEQVRKE 154
            |:.||.||.|::| ||.:..::.::
  Fly   134 PEEIRQTFNIEDD-LPIDTAELGED 157

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	SKP1	1..161	CDD:227528	77/155 (50%)
		Skp1	1..110	CDD:214704	55/109 (50%)
		Skp1	84..158	CDD:279768	38/71 (54%)
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	54/107 (50%)
		Skp1	88..>147	CDD:279768	36/59 (61%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45452343
Domainoid	1	1.000	51	1.000	Domainoid score	I4316
eggNOG	1	0.900	-	-		E1_COG5201
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	166	1.000	Inparanoid score	I1572
Isobase	1	0.950	-	0	Normalized mean entropy	S272
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	1	1.000	-	-		otm46619
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X346
	11	10.850