Protein Alignment SkpB and skr-3

DIOPT Version :9

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_507059.1
• Gene: skr-3 / 180081
• WormBaseID: WBGene00004809
• Length: 167
• Species: Caenorhabditis elegans
• Alignment Length: 162
• Identity: 82/162 - (50%)
• Similarity: 110/162 - (67%)
• Gaps: 9/162 - (5%)

  Fly     4 IRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNS----VLPLPNVNSLILKKVLHWATYHK 64
            |:|.|:|.:.|...:::...|:||...|::||.|...|    .:||..|.|.||:|::.|..:|.
 Worm    10 IKLTSSDDKTFTVSRKVISQSKTITDIIQNLGIEESGSTSEDTIPLQKVTSTILEKIITWCEHHA 74

  Fly    65 DD-PVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTVANMIKGK 128
            || |...:|    .|:|.|||.|||:|:|||||||||:|||||||:|:||||||.:.||||:|||
 Worm    75 DDEPKKVDE----NKKTVDISEWDAEFMKVDQGTLFEIILAANYLDIRGLLDVTTQNVANMMKGK 135

  Fly   129 SPQAIRDTFAIQNDFLPQEEEQVRKENEWCED 160
            :|..||..|.|:|||..:|.|.::|||.||||
 Worm   136 TPSQIRTLFNIENDFSEEEREAMKKENAWCED 167

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	SKP1	1..161	CDD:227528	82/162 (51%)
		Skp1	1..110	CDD:214704	51/110 (46%)
		Skp1	84..158	CDD:279768	48/73 (66%)
skr-3	NP_507059.1	Skp1	7..117	CDD:214704	51/110 (46%)
		SKP1	10..167	CDD:227528	80/160 (50%)
		Skp1	91..165	CDD:279768	48/73 (66%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160677
Domainoid	1	1.000	56	1.000	Domainoid score	I7318
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S272
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X346
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	10	9.810