Protein Alignment SkpB and skr-8

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_503044.1
• Gene: skr-8 / 178495
• WormBaseID: WBGene00004814
• Length: 194
• Species: Caenorhabditis elegans
• Alignment Length: 163
• Identity: 60/163 - (36%)
• Similarity: 88/163 - (53%)
• Gaps: 5/163 - (3%)

  Fly     2 PII-RLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNSVLPLP--NVNSLILKKVLHWATYH 63
            ||: ::||.|.::|:...|..|.|..:...|.....|...|:.|:|  ||...|||.|:.|...|
 Worm    20 PIMYKVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEKH 84

  Fly    64 KDDPVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTVANMIKGK 128
            |.:.:..|  ::...:..::..||.:|||:|...||:||:|.|||::.||::..||.||||..||
 Worm    85 KGEALPVE--DDSVPKNINVPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVANMAIGK 147

  Fly   129 SPQAIRDTFAIQNDFLPQEEEQVRKENEWCEDK 161
            ||..:|..|||..|...:..|:..||....|.|
 Worm   148 SPDELRIIFAIPTDEEDEAAERAAKEKAEAEKK 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	44/124 (35%)
		Skp1	111..158	CDD:460222	20/46 (43%)
skr-8	NP_503044.1	BTB_POZ_SKP1	22..144	CDD:349631	43/123 (35%)
		Skp1	130..>161	CDD:460222	16/30 (53%)