Protein Alignment SkpB and skr-10

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_502902.1
• Gene: skr-10 / 178447
• WormBaseID: WBGene00004816
• Length: 192
• Species: Caenorhabditis elegans
• Alignment Length: 169
• Identity: 62/169 - (36%)
• Similarity: 85/169 - (50%)
• Gaps: 17/169 - (10%)

  Fly     2 PII-RLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNSVLPLP--NVNSLILKKVLHWATYH 63
            ||: ::||.|..:|:...|..|.|.|:...|.....|...|:.|:|  ||...|||.|:.|...|
 Worm    18 PIMYKVESNDGTVFEISDEAVKQSNTLSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEKH 82

  Fly    64 K------DDPVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTVA 122
            |      ||..|.:.:        .:..||.:|||:|...||:||:|.|||::.||::..||.||
 Worm    83 KGEALPVDDDSVPKHI--------TVPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVA 139

  Fly   123 NMIKGKSPQAIRDTFAIQNDFLPQEEEQVRKENEWCEDK 161
            .|..||||..:|..|||..|...:..|:..||....|.|
 Worm   140 MMAIGKSPDELRIIFAIPTDEEDEAAERAAKEKAEAEKK 178

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	46/130 (35%)
		Skp1	111..158	CDD:460222	19/46 (41%)
skr-10	NP_502902.1	BTB_POZ_SKP1	20..142	CDD:349631	45/129 (35%)
		Skp1	128..>159	CDD:460222	15/30 (50%)