Protein Alignment SkpB and skr-15

DIOPT Version :9

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_494662.1
• Gene: skr-15 / 173729
• WormBaseID: WBGene00004821
• Length: 184
• Species: Caenorhabditis elegans
• Alignment Length: 159
• Identity: 50/159 - (31%)
• Similarity: 83/159 - (52%)
• Gaps: 10/159 - (6%)

  Fly     2 PII--RLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDN--SVLPLP--NVNSLILKKVLHWA 60
            |::  .:||.|:.:....::..|.|.|:..:|.:||..::|  |::|:|  .||...||.|:.|.
 Worm    17 PVVYYSIESNDRVVLKISEQAIKQSATLSNSITNLGYSAENAESMVPIPIEKVNGKTLKLVVEWC 81

  Fly    61 TYHKDDPVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTVANMI 125
            .:||.|||    .|........:..||..|:.::...|.:|:.|:|:|.:..||...||.:|.:.
 Worm    82 EHHKADPV----PEAYPSGNTVLPVWDRKFVDIEHDALTDLVNASNFLEVMTLLTYCCKFIAGLA 142

  Fly   126 KGKSPQAIRDTFAIQNDFLPQEEEQVRKE 154
            ||.||:.:|..|.|..|...::.|:..||
 Worm   143 KGMSPEEMRVFFCIPTDEEDEKAERFGKE 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	SKP1	1..161	CDD:227528	50/159 (31%)
		Skp1	1..110	CDD:214704	34/113 (30%)
		Skp1	84..158	CDD:279768	24/71 (34%)
skr-15	NP_494662.1	Skp1	20..127	CDD:214704	33/110 (30%)
		SKP1	23..176	CDD:227528	49/153 (32%)
		Skp1	101..167	CDD:279768	21/65 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160687
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	5.860