Protein Alignment SkpB and skr-15

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_494662.1
• Gene: skr-15 / 173729
• WormBaseID: WBGene00004821
• Length: 184
• Species: Caenorhabditis elegans
• Alignment Length: 159
• Identity: 50/159 - (31%)
• Similarity: 83/159 - (52%)
• Gaps: 10/159 - (6%)

  Fly     2 PII--RLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDN--SVLPLP--NVNSLILKKVLHWA 60
            |::  .:||.|:.:....::..|.|.|:..:|.:||..::|  |::|:|  .||...||.|:.|.
 Worm    17 PVVYYSIESNDRVVLKISEQAIKQSATLSNSITNLGYSAENAESMVPIPIEKVNGKTLKLVVEWC 81

  Fly    61 TYHKDDPVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTVANMI 125
            .:||.|||    .|........:..||..|:.::...|.:|:.|:|:|.:..||...||.:|.:.
 Worm    82 EHHKADPV----PEAYPSGNTVLPVWDRKFVDIEHDALTDLVNASNFLEVMTLLTYCCKFIAGLA 142

  Fly   126 KGKSPQAIRDTFAIQNDFLPQEEEQVRKE 154
            ||.||:.:|..|.|..|...::.|:..||
 Worm   143 KGMSPEEMRVFFCIPTDEEDEKAERFGKE 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	38/127 (30%)
		Skp1	111..158	CDD:460222	16/44 (36%)
skr-15	NP_494662.1	BTB_POZ_SKP1	20..139	CDD:349631	37/122 (30%)
		Skp1	130..175	CDD:460222	16/42 (38%)